G1583152



Basic Information


Item Value
gene id G1583152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2472575 ~ 2473613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1812270
cctcccctgactcctcctcagtctgtcagtgagcaagaactatctctctctcctatctcactctctctccctcctcccctgtctcctcctcaggctgtcagtgagtaagaactatctctctcctatctctctctctctccctcctcccctgtctcctcctcagtctgtcagtgagtaatatctatctctctctcctatctcactctctctccctcctcccctgtctcctcctcaggctgtcagtgagtaagaactatctctctcctatctctctctctctccctcctcccctgtctcctcagtCCGTCAGTGAGtaatatctatctctctctcctatctctctctctccctcctcccctgtctcctcctcagtctgtcagtgagtaaatctctctctctctctctccctcctcccctgtctcctcagtCCGTCAGTGAGtaatatctatctctctctcctatctctctctctccctcctcccctgtctcctcctcagtctgtcagtgagtaaatctctctctctctccctcctcccctgtctcctcctcagtctgtcagtgagtaagaactatctctctctcccttctcccctgtctcctcctaccaACCCTCTCTCAGtaagaactatctctctctcctatctctctctctctccctcctcccctgtctcctcctcaggcTGTCAGTGAGTAATAActatct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1812270 True 703 lncRNA 0.52 2 2472575 2473613

Neighbor


gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 309313 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 596259 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 623239 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 652603 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 756486 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 263473 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 296680 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 415350 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 433204 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 526209 2951647 ~ 3001920 (+)
G1583137 NA non-coding upstream 5434 2418102 ~ 2467141 (+)
G1583151 NA non-coding upstream 7529 2464634 ~ 2465046 (+)
G1583037 NA non-coding upstream 13699 2308039 ~ 2458876 (+)
G1583034 NA non-coding upstream 14995 2430205 ~ 2457580 (+)
G1583147 NA non-coding upstream 17458 2454755 ~ 2455117 (+)
G1583163 NA non-coding downstream 44509 2518122 ~ 2713339 (+)
G1583174 NA non-coding downstream 78543 2552156 ~ 2632600 (+)
G1583182 NA non-coding downstream 139267 2612880 ~ 2885152 (+)
G1583188 NA non-coding downstream 150763 2624376 ~ 2624688 (+)
G1583190 NA non-coding downstream 158135 2631748 ~ 2633646 (+)
G1583003 NA other upstream 271702 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 870842 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 907906 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1514129 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2421384 48513 ~ 51819 (+)
G1583215 NA other downstream 340261 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 558906 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 959103 3416203 ~ 3445744 (+)

Expression



Co-expression Network