G1583163


Basic Information

Item Value
gene id G1583163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2518122 ~ 2713339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812284
tgagcagatcactgtgagtccaggaagGAGATCATCTGATCTTCCACACTCCCTCAGTGAAGACTCAGACCCAGAACAGGAAACTCTAATCCCTATAGTGGTGTTTCCAGGTGGTACTGAAACAGTGGAGCCACAACCcatctgtctacacactactgcagcTACATTCTCCTTGTTCCAGTCAGCTCCCACAatcctccactctccctggtcgtaccactccactccaccagcacagcgactgcctcctccca

Function

NR:

description
CD5 antigen-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812284 True 254 lncRNA 0.52 2 2518122 2713339

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 354860 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 641806 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 668786 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 698150 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 802033 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 23747 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 56954 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 175624 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 193478 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 286483 2951647 ~ 3001920 (+)
G1583136 NA non-coding upstream 40592 2415278 ~ 2477530 (+)
G1583152 NA non-coding upstream 44509 2472575 ~ 2473613 (+)
G1583137 NA non-coding upstream 50981 2418102 ~ 2467141 (+)
G1583151 NA non-coding upstream 53076 2464634 ~ 2465046 (+)
G1583037 NA non-coding upstream 59246 2308039 ~ 2458876 (+)
G1583212 NA non-coding downstream 16492 2729831 ~ 2730727 (+)
G1583230 NA non-coding downstream 44507 2757846 ~ 2758239 (+)
G1583215 NA non-coding downstream 51860 2765199 ~ 2815294 (+)
G1583235 NA non-coding downstream 53574 2766913 ~ 2767609 (+)
G1583238 NA non-coding downstream 77242 2790581 ~ 2791419 (+)
G1583003 NA other upstream 317249 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 916389 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 953453 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1559676 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2466931 48513 ~ 51819 (+)
LOC110517772 LOC106610548 other downstream 319180 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 719377 3416203 ~ 3445744 (+)

Expression


Co-expression Network