G1583174


Basic Information

Item Value
gene id G1583174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2552156 ~ 2632600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812305
catgagtagtgggcctacagtcactgagacaacatatgttgatatcaggctgaagcaggacatctggaacaagaggagagaaaaagaaaacgtAGCTCCTCAACTACTTTCCTCATTTAGATGTGACAATAACATGACATGTGACAGTGGTAGTGAGTAGAGACGTTCACTGAGATAACACTCACATACAAAAGCATTCTGGGATATTTAAGTTGTATTTGattcctacttgactgagtgatctatttagtaaagcagactgacaagctaaacagtcatcatgagaggtgcagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812305 True 296 lncRNA 0.41 2 2552156 2632600

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 388894 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 675840 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 702820 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 732184 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 836067 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 104486 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 137693 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 256363 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 274217 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 367222 2951647 ~ 3001920 (+)
G1583103 NA non-coding upstream 27572 2258850 ~ 2524584 (+)
G1583072 NA non-coding upstream 30899 2170499 ~ 2521257 (+)
G1583041 LOC106594044 non-coding upstream 31677 2465825 ~ 2520479 (+)
G1583136 NA non-coding upstream 74626 2415278 ~ 2477530 (+)
G1583152 NA non-coding upstream 78543 2472575 ~ 2473613 (+)
G1583199 NA non-coding downstream 33489 2666089 ~ 2685445 (+)
G1583200 NA non-coding downstream 39032 2671632 ~ 2693036 (+)
G1583201 NA non-coding downstream 47963 2680563 ~ 2710237 (+)
G1583205 NA non-coding downstream 70389 2702989 ~ 2703358 (+)
G1583039 NA non-coding downstream 73381 2705981 ~ 2734147 (+)
G1583003 NA other upstream 351283 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 950423 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 987487 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1593710 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2500965 48513 ~ 51819 (+)
G1583215 NA other downstream 181274 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 399919 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 800116 3416203 ~ 3445744 (+)

Expression


Co-expression Network