G1583188


Basic Information

Item Value
gene id G1583188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2624376 ~ 2624688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812321
GAAGTGGCTCAAGTGTTGGCACCAACTACAGATGAACATATAGATGAAGACTCAGACGTCAACATGGACCAGTCGGCGTTGTACCAACCACCATTGAACCAGTCATGGGACACCACACTGAGAAAGGGGATGCAAAGCAGTGGTTTATACCAAAAGCACCCTCTGGATTGTGATCTACTGGCTGGATTTGGGAAATATCTCCG

Function

NR:

description
uncharacterized protein LOC110492155

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812321 True 203 lncRNA 0.48 2 2624376 2624688

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 461114 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 748060 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 775040 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 804404 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 908287 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 112398 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 145605 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 264275 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 282129 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 375134 2951647 ~ 3001920 (+)
G1583005 LOC106592562 non-coding upstream 4669 2401929 ~ 2619707 (+)
G1583103 NA non-coding upstream 99792 2258850 ~ 2524584 (+)
G1583041 LOC106594044 non-coding upstream 103897 2465825 ~ 2520479 (+)
G1583136 NA non-coding upstream 146846 2415278 ~ 2477530 (+)
G1583152 NA non-coding upstream 150763 2472575 ~ 2473613 (+)
G1583190 NA non-coding downstream 7060 2631748 ~ 2633646 (+)
G1583191 NA non-coding downstream 7400 2632088 ~ 2634022 (+)
G1583199 NA non-coding downstream 41401 2666089 ~ 2685445 (+)
G1583200 NA non-coding downstream 46944 2671632 ~ 2693036 (+)
G1583201 NA non-coding downstream 55875 2680563 ~ 2710237 (+)
G1583003 NA other upstream 423503 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1022643 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1059707 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1665930 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2573185 48513 ~ 51819 (+)
G1583215 NA other downstream 189186 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 407831 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 808028 3416203 ~ 3445744 (+)

Expression


Co-expression Network