G1583190


Basic Information

Item Value
gene id G1583190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2631748 ~ 2633646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812323
caacagcattaccaggtaggcaggtgttgttctctctgtctgaggtgtcacagtccaggagaagggactctttgcctttacactggaactctttatcccaggtctgaccctcaccttctccatagagccccccctgtagagctgcaggagccCCACAGCCAAGCTCCCCACAGACTACCTCTGCATCCTGCCGGTCAAAGtcagcttcac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812323 True 210 lncRNA 0.55 2 2631748 2633646

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 468486 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 755432 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 782412 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 811776 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 915659 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 103440 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 136647 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 255317 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 273171 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 366176 2951647 ~ 3001920 (+)
G1583188 NA non-coding upstream 7060 2624376 ~ 2624688 (+)
G1583005 LOC106592562 non-coding upstream 12041 2401929 ~ 2619707 (+)
G1583103 NA non-coding upstream 107164 2258850 ~ 2524584 (+)
G1583041 LOC106594044 non-coding upstream 111269 2465825 ~ 2520479 (+)
G1583136 NA non-coding upstream 154218 2415278 ~ 2477530 (+)
G1583199 NA non-coding downstream 32443 2666089 ~ 2685445 (+)
G1583200 NA non-coding downstream 37986 2671632 ~ 2693036 (+)
G1583201 NA non-coding downstream 46917 2680563 ~ 2710237 (+)
G1583205 NA non-coding downstream 69343 2702989 ~ 2703358 (+)
G1583039 NA non-coding downstream 72335 2705981 ~ 2734147 (+)
G1583003 NA other upstream 430875 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1030015 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1067079 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1673302 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2580557 48513 ~ 51819 (+)
G1583215 NA other downstream 180228 2765199 ~ 2815294 (+)
LOC110517772 LOC106610548 other downstream 398873 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 799070 3416203 ~ 3445744 (+)

Expression


Co-expression Network