G1583200


Basic Information

Item Value
gene id G1583200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2671632 ~ 2693036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812336
ttataatatatcttacaaaatcatatctcagtaactgtcacaaGTGTATATCAGTATAACAGCATCATACCTGTGCtccacaacagggtcatcagtaCCACTGCAGGTATCATATCTGTCTCTAACTGGGGCTCCACAGTCTGCTGTCATAAAGAGAGGACTGATGTGTGGAAAATACTGCTAGGCTATATGACTTCTCTCTCATTACGTCCTAACTTCAATGATGTGAGATTAACTTCTTAGCAACTTATCTTGGATCAGTGGTTGAACACACTACAGCaaactgatatgttaaaaaaactccacaggaaactgctgacagagcagcaacatttcacatagtgtcctataatatcacctctaactttctactgcttgagttcacctcttatagaatattggcttaatgttccagcacctaaatataaacagtaccagcacccaaaatgagtactgatgagTCTGTTAGTAAGAACTATttatctctcccttctcccctgtctccttctaccaacccagTCTGTTAGTAAgaactatttctctctcccttctccctgtctcctcctcagtctgtcagtgagtaagaactatctctctctcctatctctctctctccctcctcccctgtctcctcctcaggcTGTCAGTGAGTAAGATCtcactctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812336 True 667 lncRNA 0.42 2 2671632 2693036

Neighbor

gene id symbol gene type direction distance location
LOC118941409 NA coding upstream 508370 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 795316 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 822296 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 851660 1819901 ~ 1819972 (+)
trnae-cuc-281 NA coding upstream 955543 1716018 ~ 1716089 (+)
LOC118941408 NA coding downstream 44050 2737086 ~ 2770154 (+)
LOC110518136 LOC106592283 coding downstream 77257 2770293 ~ 2811692 (+)
LOC118941397 LOC106601386 coding downstream 195927 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 213781 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 306786 2951647 ~ 3001920 (+)
G1583029 NA non-coding upstream 24950 2452017 ~ 2646682 (+)
G1583025 NA non-coding upstream 32284 2288886 ~ 2639348 (+)
G1583191 NA non-coding upstream 37610 2632088 ~ 2634022 (+)
G1583190 NA non-coding upstream 37986 2631748 ~ 2633646 (+)
G1583174 NA non-coding upstream 39032 2552156 ~ 2632600 (+)
G1583205 NA non-coding downstream 9953 2702989 ~ 2703358 (+)
G1583039 NA non-coding downstream 12945 2705981 ~ 2734147 (+)
G1583212 NA non-coding downstream 36795 2729831 ~ 2730727 (+)
G1583230 NA non-coding downstream 64810 2757846 ~ 2758239 (+)
G1583215 NA non-coding downstream 72163 2765199 ~ 2815294 (+)
G1583003 NA other upstream 470759 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1069899 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1106963 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1713186 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2620441 48513 ~ 51819 (+)
LOC110517772 LOC106610548 other downstream 339483 3032473 ~ 3091701 (+)
LOC110534752 LOC106602173 other downstream 739680 3416203 ~ 3445744 (+)

Expression


Co-expression Network