G1583241


Basic Information

Item Value
gene id G1583241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2797284 ~ 2798738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812411
acacacacacacacacacacacaccaagtctcTGCTGAGGAAGGTGCgataccaccccactaccaggcTATTCACAACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCAATTCACAACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCATCCCACTACCAGGCTATTCACCaccccactgtgtctgtgtgtcagacagtAGAACTAGGTTGTTTCTGTGTGTCAGACAGTAGAACTAGGTTGTTTCTGTGTGTCAGACAGTAGAACTAGGTTGTATCTGTGtgtcagacagtagatctagGTTGTATCTGTGtgtcagacagtagatctaggttgtatctgtgtgtcagacagtagaactaggttgtatctgtgtgtcagacagtagaagtagGTGGTATCTGTGTGTCAGACAGTAGAactaggttgtgtctgtgtgtcagacagtAGAACTAGGTTATATCTGTGTGTCAGATAGTAGAACTAGGTTGTAT
>TU1812412
acacacacacacacacacacacaccaagtctcTGCTGAGGAAGGTGCgataccaccccactaccaggcTATTCACAACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCAATTCACAACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCACCCCACTACCAGGCTATTCACCATCCCACTACCAGGCTATTCACCaccccactgtgtctgtgtgtcagacagtAGAACTAGGTTGTTTCTGTGTGTCAGACAGTAGAACTAGGTTGTTTCTGTGTGTCAGACAGTAGAACTAGGTTGTTTCTGTGTGTCAGACAGTAGAACTAGGTTGTATCTGTGtgtcagacagtagatctaggttgtgtctgtgtgtcagacagtagatctaggttgtatctgtgtgtcagacagtagaagtagGTGGTATCTGTGTGTCAGACAGTAGAactagGTGGTATCTGTGTGTCAGACAGTTGAACTAGGTTATATCTGTGTGTCAGATAGTAGAACTAGGTTGTAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812411 False 628 lncRNA 0.49 7 2797284 2798738
TU1812412 True 628 lncRNA 0.49 6 2797284 2798738

Neighbor

gene id symbol gene type direction distance location
LOC118941408 NA coding upstream 27130 2737086 ~ 2770154 (+)
LOC118941409 NA coding upstream 634022 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 920968 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 947948 1830544 ~ 1849336 (+)
trnaq-cug-118 NA coding upstream 977312 1819901 ~ 1819972 (+)
LOC118941397 LOC106601386 coding downstream 90225 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 108079 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 201084 2951647 ~ 3001920 (+)
LOC110517772 LOC106610548 coding downstream 233735 3032473 ~ 3091701 (+)
LOC110510463 LOC106590758 coding downstream 306661 3105399 ~ 3128798 (+)
G1583238 NA non-coding upstream 5865 2790581 ~ 2791419 (+)
G1583235 NA non-coding upstream 29675 2766913 ~ 2767609 (+)
G1583230 NA non-coding upstream 39045 2757846 ~ 2758239 (+)
G1583039 NA non-coding upstream 63137 2705981 ~ 2734147 (+)
G1583212 NA non-coding upstream 66557 2729831 ~ 2730727 (+)
G1583243 NA non-coding downstream 28088 2826826 ~ 2831680 (+)
G1583261 LOC106601384 non-coding downstream 77689 2876427 ~ 2983911 (+)
G1583129 NA non-coding downstream 95267 2894005 ~ 2894563 (+)
G1583003 NA other upstream 596411 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1195551 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1232615 1400041 ~ 1564792 (+)
G1582090 LOC106602215 other upstream 1838838 810245 ~ 958446 (+)
LOC110516050 nar5 other upstream 2746093 48513 ~ 51819 (+)
G1583215 NA other downstream 15136 2765199 ~ 2815294 (+)
LOC110534752 LOC106602173 other downstream 633978 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 684908 3483359 ~ 3492477 (+)

Expression


Co-expression Network