G1583243


Basic Information

Item Value
gene id G1583243
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2826826 ~ 2831680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812414
ctattgtagtggtgttgatgttctattgtagtggtgttgatgtcctattgtagtggggttgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgttctattgtagtggtgttgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtgatgtcctattgtagtggtgttgatgtgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtgatgttctattgtagtggtgttgatgtcctattgtagtggggttgatgtgatgtcctattgtagtggtgttgacgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtgatgttctattgtagtggtgttgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtcctattgtagtggtgttgatgtgatgtcctattgtagtggggttgatgtcctattgtagtggtgttgatgtactattgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812414 True 545 lncRNA 0.41 2 2826826 2831680

Neighbor

gene id symbol gene type direction distance location
LOC110518136 LOC106592283 coding upstream 15134 2770293 ~ 2811692 (+)
LOC118941408 NA coding upstream 56672 2737086 ~ 2770154 (+)
LOC118941409 NA coding upstream 663564 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 950510 1875632 ~ 1876316 (+)
LOC118941531 LOC105006014 coding upstream 977490 1830544 ~ 1849336 (+)
LOC118941397 LOC106601386 coding downstream 57283 2888963 ~ 3003056 (+)
LOC118941401 LOC106609853 coding downstream 75137 2906817 ~ 2909482 (+)
LOC118941407 LOC106591540 coding downstream 168142 2951647 ~ 3001920 (+)
LOC110517772 LOC106610548 coding downstream 200793 3032473 ~ 3091701 (+)
LOC110510463 LOC106590758 coding downstream 273719 3105399 ~ 3128798 (+)
G1583215 NA non-coding upstream 11532 2765199 ~ 2815294 (+)
G1583241 NA non-coding upstream 28088 2797284 ~ 2798738 (+)
G1583238 NA non-coding upstream 35407 2790581 ~ 2791419 (+)
G1583235 NA non-coding upstream 59217 2766913 ~ 2767609 (+)
G1583230 NA non-coding upstream 68587 2757846 ~ 2758239 (+)
G1583261 LOC106601384 non-coding downstream 44747 2876427 ~ 2983911 (+)
G1583129 NA non-coding downstream 62325 2894005 ~ 2894563 (+)
G1583276 NA non-coding downstream 82256 2913936 ~ 2960601 (+)
G1583003 NA other upstream 625953 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1225093 1580873 ~ 1620973 (+)
LOC110510959 LOC106602231 other upstream 1262157 1400041 ~ 1564792 (+)
LOC110534752 LOC106602173 other downstream 601036 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 651966 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 786158 3609578 ~ 3622792 (+)

Expression


Co-expression Network