G1583173


Basic Information

Item Value
gene id G1583173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 2953098 ~ 2954024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812304
tcaggacagcgatcactcacctgtatatagcctctccactgtaaataacctctctactgtatataacctctctattgtatatagcctctctactgtatataacctctctattgtatatagcctctccactgtaaataacctctctactgtatataacctctctattgtatatagcctctctactgtatataacctctctactgtatatagtctctctactgtatataacctctctactgtatatagcttctctactgtatatagcctctctactgtatatagcctccctactgtatatagcctctctactgtatatagcctctactgtatataacctctctactgtatgtagtgaggtaaaatacagtagagaggttatatgcagtagagaggttatatacagtagagaagcaAAATACAGTagagtggctatatacagtagaggctatttacagtagagaggttatatacagtagagaggctatatacagtagagaggttatatacagtagagaggttatatacagtagagaggttatatatagtagagaggttatatacagtagataggctatatacagtagagaggttatatacagtagagatgttatatacagtagagaggttatatacagtagagaggttatatacagtagagaggttatatacaggttatattcactgtctttttactgttgtttttactaATCTGTTGCTcacataatatatattttttacttaaaaattgcactgttggttagggcc

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812304 True 765 lncRNA 0.35 3 2953098 2954024

Neighbor

gene id symbol gene type direction distance location
LOC118941401 LOC106609853 coding upstream 44184 2906817 ~ 2909482 (+)
LOC110518136 LOC106592283 coding upstream 141406 2770293 ~ 2811692 (+)
LOC118941408 NA coding upstream 182944 2737086 ~ 2770154 (+)
LOC118941409 NA coding upstream 789836 1942489 ~ 2163262 (+)
LOC110497256 NA coding upstream 1076782 1875632 ~ 1876316 (+)
LOC118941407 LOC106591540 coding downstream 45798 2951647 ~ 3001920 (+)
LOC110517772 LOC106610548 coding downstream 78449 3032473 ~ 3091701 (+)
LOC110510463 LOC106590758 coding downstream 151375 3105399 ~ 3128798 (+)
LOC110511406 LOC106588734 coding downstream 182624 3136648 ~ 3139833 (+)
trnae-cuc-282 NA coding downstream 267894 3221918 ~ 3221989 (+)
G1583291 LOC106601385 non-coding upstream 1464 2951043 ~ 2951634 (+)
G1583288 NA non-coding upstream 11726 2940276 ~ 2941372 (+)
G1583280 NA non-coding upstream 31626 2918392 ~ 2921472 (+)
LOC118941397 LOC106601386 non-coding upstream 46572 2888963 ~ 3003056 (+)
G1583294 NA non-coding downstream 3392 2957416 ~ 2957903 (+)
G1583609 NA non-coding downstream 53715 3007739 ~ 3008955 (+)
G1583643 NA non-coding downstream 127001 3081025 ~ 3081338 (+)
G1583644 NA non-coding downstream 129052 3083076 ~ 3083289 (+)
G1583215 NA other upstream 137804 2765199 ~ 2815294 (+)
G1583003 NA other upstream 752225 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1351365 1580873 ~ 1620973 (+)
LOC110534752 LOC106602173 other downstream 478692 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 529622 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 663814 3609578 ~ 3622792 (+)
G1583951 NA other downstream 686625 3640649 ~ 3642876 (+)

Expression


Co-expression Network