G1583609


Basic Information

Item Value
gene id G1583609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3007739 ~ 3008955 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812899
ccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtctgtgttccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtctgtgtactccagtacatgtgtagtgtaggatgtgtgttcactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtgtgtgtactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccaccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccaccagtacatgtgtagtgtaggatgtgtgtccaccagtacatgtgtagtgtaggatgtgtgtccactccagtacatgtgtagtgtaggatgtgtgtccactccagtac

Function

NR:

description
dynein heavy chain-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812899 True 691 lncRNA 0.47 2 3007739 3008955

Neighbor

gene id symbol gene type direction distance location
LOC118941397 LOC106601386 coding upstream 4683 2888963 ~ 3003056 (+)
LOC118941407 LOC106591540 coding upstream 6883 2951647 ~ 3001920 (+)
LOC118941401 LOC106609853 coding upstream 98825 2906817 ~ 2909482 (+)
LOC110518136 LOC106592283 coding upstream 196047 2770293 ~ 2811692 (+)
LOC118941408 NA coding upstream 237585 2737086 ~ 2770154 (+)
LOC110517772 LOC106610548 coding downstream 23518 3032473 ~ 3091701 (+)
LOC110510463 LOC106590758 coding downstream 96444 3105399 ~ 3128798 (+)
LOC110511406 LOC106588734 coding downstream 127693 3136648 ~ 3139833 (+)
trnae-cuc-282 NA coding downstream 212963 3221918 ~ 3221989 (+)
trnae-cuc-283 NA coding downstream 213144 3222099 ~ 3222170 (+)
G1583261 LOC106601384 non-coding upstream 23828 2876427 ~ 2983911 (+)
G1583276 NA non-coding upstream 47138 2913936 ~ 2960601 (+)
G1583294 NA non-coding upstream 49836 2957416 ~ 2957903 (+)
G1583173 NA non-coding upstream 53715 2953098 ~ 2954024 (+)
G1583643 NA non-coding downstream 72070 3081025 ~ 3081338 (+)
G1583644 NA non-coding downstream 74121 3083076 ~ 3083289 (+)
G1583648 NA non-coding downstream 86470 3095425 ~ 3097219 (+)
G1583649 NA non-coding downstream 87208 3096163 ~ 3096961 (+)
G1583215 NA other upstream 192445 2765199 ~ 2815294 (+)
G1583003 NA other upstream 806866 2198928 ~ 2200873 (+)
LOC118941396 LOC106602234 other upstream 1406006 1580873 ~ 1620973 (+)
LOC110534752 LOC106602173 other downstream 423761 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 474691 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 608883 3609578 ~ 3622792 (+)
G1583951 NA other downstream 631694 3640649 ~ 3642876 (+)

Expression


Co-expression Network