G1583658


Basic Information

Item Value
gene id G1583658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3113982 ~ 3114264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1812986
ttactGGATGAATTTAAGTGACAAGCCATTCAGACAATCCTGATTGATCGTAAACTACATTATACTGACATTTtatttaaaactgtattttattatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacctggccaagatcaagcaaagcagtgtgaaaacaacaacacagagatacacatgggataaaca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1812986 True 217 lncRNA 0.35 2 3113982 3114264

Neighbor

gene id symbol gene type direction distance location
LOC110517772 LOC106610548 coding upstream 22281 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 coding upstream 110926 2888963 ~ 3003056 (+)
LOC118941407 LOC106591540 coding upstream 113126 2951647 ~ 3001920 (+)
LOC118941401 LOC106609853 coding upstream 205068 2906817 ~ 2909482 (+)
LOC110518136 LOC106592283 coding upstream 302290 2770293 ~ 2811692 (+)
LOC110511406 LOC106588734 coding downstream 22384 3136648 ~ 3139833 (+)
trnae-cuc-282 NA coding downstream 107654 3221918 ~ 3221989 (+)
trnae-cuc-283 NA coding downstream 107835 3222099 ~ 3222170 (+)
trnae-cuc-284 NA coding downstream 109049 3223313 ~ 3223384 (+)
trnae-cuc-285 NA coding downstream 109231 3223495 ~ 3223566 (+)
G1583655 NA non-coding upstream 9176 3104490 ~ 3104806 (+)
G1583653 NA non-coding upstream 12961 3097603 ~ 3101021 (+)
G1583648 NA non-coding upstream 16763 3095425 ~ 3097219 (+)
G1583649 NA non-coding upstream 17021 3096163 ~ 3096961 (+)
LOC110510463 LOC106590758 non-coding downstream 3973 3105399 ~ 3128798 (+)
G1583675 NA non-coding downstream 39615 3153879 ~ 3154202 (+)
G1583686 NA non-coding downstream 77628 3191892 ~ 3193229 (+)
G1583783 NA non-coding downstream 175993 3290257 ~ 3290466 (+)
LOC110534750 ma7d1 non-coding downstream 198795 3309693 ~ 3314825 (+)
G1583215 NA other upstream 298688 2765199 ~ 2815294 (+)
G1583003 NA other upstream 913109 2198928 ~ 2200873 (+)
LOC110534752 LOC106602173 other downstream 318452 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 369382 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 503574 3609578 ~ 3622792 (+)
G1583951 NA other downstream 526385 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 573904 3687991 ~ 3692012 (+)

Expression


Co-expression Network