G1583783


Basic Information

Item Value
gene id G1583783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3290257 ~ 3290466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813187
GCTACATTTATGACATGAATACAAAAATATCCTCCTTCGACACGGATTTGAAACAGCGATCTAAGGATATAAGCATTCACCGTTCtgcagtcctccgctctaccaactgactTCATTTTTCCTCATTTGTGAGTTAGCTTGGATTGTTTTTTAATTAGGAAACTGGAAATGCACGTTTGTTCTCTATCGGGGAATGTGCGAACAACAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813187 True 210 lncRNA 0.40 1 3290257 3290466

Neighbor

gene id symbol gene type direction distance location
trnae-cuc-374 NA coding upstream 140 3290046 ~ 3290117 (+)
trnae-cuc-373 NA coding upstream 321 3289865 ~ 3289936 (+)
trnae-cuc-372 NA coding upstream 502 3289684 ~ 3289755 (+)
trnae-cuc-371 NA coding upstream 1712 3288474 ~ 3288545 (+)
trnae-cuc-370 NA coding upstream 2741 3287445 ~ 3287516 (+)
LOC110519316 LOC106610378 coding downstream 346 3290812 ~ 3295531 (+)
LOC110513657 LOC106592508 coding downstream 13097 3303563 ~ 3308228 (+)
LOC110534750 ma7d1 coding downstream 19227 3309693 ~ 3314825 (+)
LOC110534763 LOC106610379 coding downstream 24402 3314868 ~ 3317441 (+)
LOC110534757 LOC106602178 coding downstream 34950 3325416 ~ 3329282 (+)
G1583686 NA non-coding upstream 97028 3191892 ~ 3193229 (+)
G1583675 NA non-coding upstream 136055 3153879 ~ 3154202 (+)
LOC110510463 LOC106590758 non-coding upstream 170363 3105399 ~ 3128798 (+)
G1583658 NA non-coding upstream 175993 3113982 ~ 3114264 (+)
G1583655 NA non-coding upstream 185451 3104490 ~ 3104806 (+)
G1583811 NA non-coding downstream 33116 3323582 ~ 3372508 (+)
LOC118941411 NA non-coding downstream 61362 3349758 ~ 3355397 (+)
G1583817 NA non-coding downstream 72185 3362651 ~ 3363004 (+)
G1583840 NA non-coding downstream 87610 3378076 ~ 3378327 (+)
LOC110517772 LOC106610548 other upstream 218614 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 399451 2888963 ~ 3003056 (+)
G1583215 NA other upstream 474963 2765199 ~ 2815294 (+)
LOC110518136 LOC106592283 other upstream 486826 2770293 ~ 2811692 (+)
G1583003 NA other upstream 1089384 2198928 ~ 2200873 (+)
LOC110534752 LOC106602173 other downstream 142250 3416203 ~ 3445744 (+)
LOC110497289 LOC106610394 other downstream 193180 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 327372 3609578 ~ 3622792 (+)
G1583951 NA other downstream 350183 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 397702 3687991 ~ 3692012 (+)

Expression


Co-expression Network