G1583811


Basic Information

Item Value
gene id G1583811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3323582 ~ 3372508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813240
tcTACAGTTTAAAATtgaaatgcttgtgtttctagctccatcagggcagtaatacctactgtaacacagtgaaatgcctatgtttctagctccatcagggcagtaatacctactgtaacagtgaaatgcttgtgtttctagctccatcagggcagtaatacctactgtaacacagtgaaatgcttgtgtttctagctccatcagggcagtaatacctactgtaacacagtgaaatgcttgtgtttcta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813240 True 248 lncRNA 0.40 2 3323582 3372508

Neighbor

gene id symbol gene type direction distance location
LOC110534763 LOC106610379 coding upstream 6141 3314868 ~ 3317441 (+)
LOC110534750 ma7d1 coding upstream 8757 3309693 ~ 3314825 (+)
LOC110513657 LOC106592508 coding upstream 15354 3303563 ~ 3308228 (+)
LOC110519316 LOC106610378 coding upstream 28051 3290812 ~ 3295531 (+)
trnae-cuc-374 NA coding upstream 33465 3290046 ~ 3290117 (+)
LOC110497278 LOC106602183 coding downstream 33965 3406473 ~ 3457336 (+)
LOC110534752 LOC106602173 coding downstream 43695 3416203 ~ 3445744 (+)
LOC110497286 LOC106610388 coding downstream 84914 3457422 ~ 3462567 (+)
LOC110497285 LOC106602172 coding downstream 90150 3462658 ~ 3470625 (+)
LOC110497287 LOC106610389 coding downstream 99255 3471763 ~ 3481543 (+)
G1583783 NA non-coding upstream 33116 3290257 ~ 3290466 (+)
G1583686 NA non-coding upstream 130353 3191892 ~ 3193229 (+)
G1583675 NA non-coding upstream 169380 3153879 ~ 3154202 (+)
LOC110510463 LOC106590758 non-coding upstream 203688 3105399 ~ 3128798 (+)
G1583840 NA non-coding downstream 5568 3378076 ~ 3378327 (+)
G1583841 NA non-coding downstream 5864 3378372 ~ 3378600 (+)
G1583830 NA non-coding downstream 18844 3391352 ~ 3392600 (+)
G1583825 NA non-coding downstream 66404 3438912 ~ 3444191 (+)
LOC110517772 LOC106610548 other upstream 251939 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 432776 2888963 ~ 3003056 (+)
G1583215 NA other upstream 508288 2765199 ~ 2815294 (+)
LOC110518136 LOC106592283 other upstream 520151 2770293 ~ 2811692 (+)
G1583003 NA other upstream 1122709 2198928 ~ 2200873 (+)
LOC110497289 LOC106610394 other downstream 111138 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 245330 3609578 ~ 3622792 (+)
G1583951 NA other downstream 268141 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 315660 3687991 ~ 3692012 (+)

Expression


Co-expression Network