G1583841


Basic Information

Item Value
gene id G1583841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3378372 ~ 3378600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813302
ATATAGGAtcaatctatactgaacaaaaatataaacgcaacaatcaACAATTTCATATgagtaaatcagtcaattaagATActtaaattaggccctaatctatggatttcacatgactgggaacacagacatgcatctgttgttcagataccttaaaaaaataaGGTaaaggcgtggatcagaaaaccctTCAGTATCTGGTCTGACCACCatgtgcctcatgcagcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813302 True 229 lncRNA 0.37 1 3378372 3378600

Neighbor

gene id symbol gene type direction distance location
LOC110497283 LOC106602255 coding upstream 17077 3357812 ~ 3361295 (+)
LOC118941411 NA coding upstream 22975 3349758 ~ 3355397 (+)
LOC110534762 LOC106602177 coding upstream 29425 3346348 ~ 3348947 (+)
LOC110534760 LOC106610383 coding upstream 33509 3332582 ~ 3344863 (+)
LOC110534757 LOC106602178 coding upstream 49090 3325416 ~ 3329282 (+)
LOC110497278 LOC106602183 coding downstream 27873 3406473 ~ 3457336 (+)
LOC110534752 LOC106602173 coding downstream 37603 3416203 ~ 3445744 (+)
LOC110497286 LOC106610388 coding downstream 78822 3457422 ~ 3462567 (+)
LOC110497285 LOC106602172 coding downstream 84058 3462658 ~ 3470625 (+)
LOC110497287 LOC106610389 coding downstream 93163 3471763 ~ 3481543 (+)
G1583840 NA non-coding upstream 45 3378076 ~ 3378327 (+)
G1583811 NA non-coding upstream 5864 3323582 ~ 3372508 (+)
G1583817 NA non-coding upstream 15368 3362651 ~ 3363004 (+)
LOC110534750 ma7d1 non-coding upstream 63571 3309693 ~ 3314825 (+)
G1583830 NA non-coding downstream 12752 3391352 ~ 3392600 (+)
G1583825 NA non-coding downstream 60312 3438912 ~ 3444191 (+)
G1583862 NA non-coding downstream 92197 3470797 ~ 3471025 (+)
LOC110517772 LOC106610548 other upstream 306729 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 487566 2888963 ~ 3003056 (+)
G1583215 NA other upstream 563078 2765199 ~ 2815294 (+)
LOC110518136 LOC106592283 other upstream 574941 2770293 ~ 2811692 (+)
G1583003 NA other upstream 1177499 2198928 ~ 2200873 (+)
LOC110497289 LOC106610394 other downstream 105046 3483359 ~ 3492477 (+)
LOC110497294 LOC106602191 other downstream 239238 3609578 ~ 3622792 (+)
G1583951 NA other downstream 262049 3640649 ~ 3642876 (+)
LOC118941415 LOC106602193 other downstream 309568 3687991 ~ 3692012 (+)

Expression


Co-expression Network