G1583893


Basic Information

Item Value
gene id G1583893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3524035 ~ 3524339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813357
ATACTACTAATATTCCCCCCTACTATTATGACACATTTCAAATCAAAGgttattggttgcgtacacagtTTATCAGGTGTTATAGCGGGggcagtgaaatgctggtgtcaCCTGCTCCTAACAGGGCAGTTCAAATGAGAAATAATACAATGAACTGTGTGGAGAATCCAGTATTTAAATACAGTGTGAAAGCAGCATAACAGAAACGGGAAGTGTTTTATGTCTCTATATACGTGGGGCAgcagcgttgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813357 True 254 lncRNA 0.41 2 3524035 3524339

Neighbor

gene id symbol gene type direction distance location
LOC110497299 fgl1 coding upstream 7580 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 25304 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 31558 3483359 ~ 3492477 (+)
LOC110497287 LOC106610389 coding upstream 42492 3471763 ~ 3481543 (+)
LOC110497285 LOC106602172 coding upstream 53477 3462658 ~ 3470625 (+)
LOC110497294 LOC106602191 coding downstream 85239 3609578 ~ 3622792 (+)
LOC118941415 LOC106602193 coding downstream 163652 3687991 ~ 3692012 (+)
LOC110534570 sgcz coding downstream 388148 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 855783 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 876321 4400660 ~ 4404928 (+)
G1583891 NA non-coding upstream 3944 3518913 ~ 3520091 (+)
G1583873 NA non-coding upstream 40777 3483048 ~ 3483258 (+)
G1583862 NA non-coding upstream 53010 3470797 ~ 3471025 (+)
G1583898 LOC106602190 non-coding downstream 13028 3537367 ~ 3537790 (+)
G1583899 NA non-coding downstream 13925 3538264 ~ 3539765 (+)
G1583901 NA non-coding downstream 22753 3547092 ~ 3547490 (+)
G1583903 NA non-coding downstream 25449 3549788 ~ 3551513 (+)
G1583904 NA non-coding downstream 27863 3552202 ~ 3552698 (+)
LOC110534752 LOC106602173 other upstream 88423 3416203 ~ 3445744 (+)
LOC110517772 LOC106610548 other upstream 452392 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 633229 2888963 ~ 3003056 (+)
G1583215 NA other upstream 708741 2765199 ~ 2815294 (+)
G1583951 NA other downstream 116310 3640649 ~ 3642876 (+)
G1584344 NA other downstream 538329 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 1024216 4545961 ~ 4551255 (+)

Expression


Co-expression Network