G1583906


Basic Information

Item Value
gene id G1583906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3555860 ~ 3556138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813377
gtgtaatgatcatgctttttaaaataatcttcctgatatgccacaactgtcaggtggatggattatcttggcaaaggagaaatgctcacaaacagggacgTAAAACACATTTGTGCCaaaaaattggagagaaataagctttgcttttgtgcatatggaacatttcagctcatgggaccaaaacaacatgttgcatttatatgttTGTCGGTAGAGTTTAATAGCAAAGTGCTGTTTCTTTAGACCCATTTGCCTCATGATTTGTCAAACTCAACACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813377 True 279 lncRNA 0.37 1 3555860 3556138

Neighbor

gene id symbol gene type direction distance location
LOC110497299 fgl1 coding upstream 39405 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 57129 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 63383 3483359 ~ 3492477 (+)
LOC110497287 LOC106610389 coding upstream 74317 3471763 ~ 3481543 (+)
LOC110497285 LOC106602172 coding upstream 85302 3462658 ~ 3470625 (+)
LOC110497294 LOC106602191 coding downstream 53440 3609578 ~ 3622792 (+)
LOC118941415 LOC106602193 coding downstream 131853 3687991 ~ 3692012 (+)
LOC110534570 sgcz coding downstream 356349 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 823984 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 844522 4400660 ~ 4404928 (+)
G1583904 NA non-coding upstream 3162 3552202 ~ 3552698 (+)
G1583903 NA non-coding upstream 4347 3549788 ~ 3551513 (+)
G1583901 NA non-coding upstream 8370 3547092 ~ 3547490 (+)
G1583899 NA non-coding upstream 16095 3538264 ~ 3539765 (+)
G1583898 LOC106602190 non-coding upstream 18070 3537367 ~ 3537790 (+)
G1583908 NA non-coding downstream 4267 3560405 ~ 3560720 (+)
G1583912 NA non-coding downstream 11620 3567758 ~ 3568079 (+)
G1583915 NA non-coding downstream 15951 3572089 ~ 3572809 (+)
G1583947 NA non-coding downstream 79962 3636100 ~ 3638974 (+)
LOC110534752 LOC106602173 other upstream 120248 3416203 ~ 3445744 (+)
LOC110517772 LOC106610548 other upstream 484217 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 665054 2888963 ~ 3003056 (+)
G1583215 NA other upstream 740566 2765199 ~ 2815294 (+)
G1583951 NA other downstream 84511 3640649 ~ 3642876 (+)
G1584344 NA other downstream 506530 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 992417 4545961 ~ 4551255 (+)

Expression


Co-expression Network