G1583908


Basic Information

Item Value
gene id G1583908
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3560405 ~ 3560720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813379
aagacagccctgtttggtaaaagaccaagtccgtattatgggaagaacagctcagataagcaaagagaaagacagtccatcattactttaagacatgaaggtcagtcaatgcggaaaatgtcaagaactttgacattttcttcaagtgcagtcgcaaaaaccatcaagcgctatgatgaaactggctctcatgaggaccgccacaggaaaggaagagccagagttacctctgctgcagaggataagttcattagagttaccagcctctgaaattgcagcccaaataaatgcttcacagagttcaagtaacagacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813379 True 316 lncRNA 0.43 1 3560405 3560720

Neighbor

gene id symbol gene type direction distance location
LOC110497299 fgl1 coding upstream 43950 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 61674 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 67928 3483359 ~ 3492477 (+)
LOC110497287 LOC106610389 coding upstream 78862 3471763 ~ 3481543 (+)
LOC110497285 LOC106602172 coding upstream 89847 3462658 ~ 3470625 (+)
LOC110497294 LOC106602191 coding downstream 48858 3609578 ~ 3622792 (+)
LOC118941415 LOC106602193 coding downstream 127271 3687991 ~ 3692012 (+)
LOC110534570 sgcz coding downstream 351767 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 819402 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 839940 4400660 ~ 4404928 (+)
G1583906 NA non-coding upstream 4267 3555860 ~ 3556138 (+)
G1583904 NA non-coding upstream 7707 3552202 ~ 3552698 (+)
G1583903 NA non-coding upstream 8892 3549788 ~ 3551513 (+)
G1583901 NA non-coding upstream 12915 3547092 ~ 3547490 (+)
G1583899 NA non-coding upstream 20640 3538264 ~ 3539765 (+)
G1583912 NA non-coding downstream 7038 3567758 ~ 3568079 (+)
G1583915 NA non-coding downstream 11369 3572089 ~ 3572809 (+)
G1583947 NA non-coding downstream 75380 3636100 ~ 3638974 (+)
G1583950 NA non-coding downstream 77776 3638496 ~ 3639622 (+)
LOC110534752 LOC106602173 other upstream 124793 3416203 ~ 3445744 (+)
LOC110517772 LOC106610548 other upstream 488762 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 669599 2888963 ~ 3003056 (+)
G1583215 NA other upstream 745111 2765199 ~ 2815294 (+)
G1583951 NA other downstream 79929 3640649 ~ 3642876 (+)
G1584344 NA other downstream 501948 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 987835 4545961 ~ 4551255 (+)

Expression


Co-expression Network