G1583912


Basic Information

Item Value
gene id G1583912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3567758 ~ 3568079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813383
cacacacacacacacagtctcacacacacacacacacacagtcagtcagtctcacgTTTGCTGAGGGCTGCTGAAGATCCGTTACTCTCGCTGGCGGCGCTGCCCAGAGAAGAGGAGCTAAGGCTTGTGGGTAGGTTCTTCACGGGCAGTTTGGACACGGCGGCGGCAGCAGCCGAAGGGCGAGCAGCACCTAACCCCTGGTTGACGGATGGCTTTGGGTTAGAGGTCACCACAGTAGGCCCAGGCAATCCAGAGGGTCTGTCTGTGACACGTGGCTTGGGGATA

Function

NR:

description
PREDICTED: microtubule-associated tumor suppressor 1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813383 True 285 lncRNA 0.59 2 3567758 3568079

Neighbor

gene id symbol gene type direction distance location
LOC110497299 fgl1 coding upstream 51303 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 69027 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 75281 3483359 ~ 3492477 (+)
LOC110497287 LOC106610389 coding upstream 86215 3471763 ~ 3481543 (+)
LOC110497285 LOC106602172 coding upstream 97200 3462658 ~ 3470625 (+)
LOC110497294 LOC106602191 coding downstream 41499 3609578 ~ 3622792 (+)
LOC118941415 LOC106602193 coding downstream 119912 3687991 ~ 3692012 (+)
LOC110534570 sgcz coding downstream 344408 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 812043 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 832581 4400660 ~ 4404928 (+)
G1583908 NA non-coding upstream 7038 3560405 ~ 3560720 (+)
G1583906 NA non-coding upstream 11620 3555860 ~ 3556138 (+)
G1583904 NA non-coding upstream 15060 3552202 ~ 3552698 (+)
G1583903 NA non-coding upstream 16245 3549788 ~ 3551513 (+)
G1583901 NA non-coding upstream 20268 3547092 ~ 3547490 (+)
G1583915 NA non-coding downstream 4010 3572089 ~ 3572809 (+)
G1583947 NA non-coding downstream 68021 3636100 ~ 3638974 (+)
G1583950 NA non-coding downstream 70417 3638496 ~ 3639622 (+)
G1583953 NA non-coding downstream 75957 3644036 ~ 3647184 (+)
LOC110534752 LOC106602173 other upstream 132146 3416203 ~ 3445744 (+)
LOC110517772 LOC106610548 other upstream 496115 3032473 ~ 3091701 (+)
LOC118941397 LOC106601386 other upstream 676952 2888963 ~ 3003056 (+)
G1583215 NA other upstream 752464 2765199 ~ 2815294 (+)
G1583951 NA other downstream 72570 3640649 ~ 3642876 (+)
G1584344 NA other downstream 494589 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 980476 4545961 ~ 4551255 (+)

Expression


Co-expression Network