G1583979


Basic Information

Item Value
gene id G1583979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3716034 ~ 3716290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813485
actgtgctgacacaagcaactaacatagacaatcacccaccaacaaacagtgaaacccaggctacctaagtatgattctcaatcagagaaaactaatgacacctgcatctgattgagaaccatactaggccgaaacatagaaatccccaaatcatagaaaaacaaacagactgcccaccccaactcactccctgacgatactaaataacgacaaaacaaaggaaataaaggtcagaacgtgacacccagACCaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813485 True 257 lncRNA 0.42 1 3716034 3716290

Neighbor

gene id symbol gene type direction distance location
LOC118941415 LOC106602193 coding upstream 24022 3687991 ~ 3692012 (+)
LOC110497294 LOC106602191 coding upstream 93242 3609578 ~ 3622792 (+)
LOC110497299 fgl1 coding upstream 199579 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 217303 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 223557 3483359 ~ 3492477 (+)
LOC110534570 sgcz coding downstream 196197 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 663832 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 684370 4400660 ~ 4404928 (+)
LOC118941418 LOC106602209 coding downstream 702411 4418701 ~ 4423685 (+)
LOC118941534 LOC106595337 coding downstream 719517 4435807 ~ 4442006 (+)
G1583958 NA non-coding upstream 56534 3658724 ~ 3659500 (+)
G1583956 NA non-coding upstream 60089 3654932 ~ 3655945 (+)
G1583953 NA non-coding upstream 68850 3644036 ~ 3647184 (+)
G1583950 NA non-coding upstream 76412 3638496 ~ 3639622 (+)
G1583947 NA non-coding upstream 77060 3636100 ~ 3638974 (+)
G1583985 NA non-coding downstream 7907 3724197 ~ 3724427 (+)
G1583990 NA non-coding downstream 9864 3726154 ~ 3726383 (+)
G1583991 NA non-coding downstream 13043 3729333 ~ 3729551 (+)
G1583994 NA non-coding downstream 18561 3734851 ~ 3735103 (+)
G1584002 NA non-coding downstream 32772 3749062 ~ 3749433 (+)
G1583951 NA other upstream 73158 3640649 ~ 3642876 (+)
LOC110534752 LOC106602173 other upstream 280422 3416203 ~ 3445744 (+)
G1584344 NA other downstream 346378 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 832265 4545961 ~ 4551255 (+)
G1584899 NA other downstream 1405701 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 1714007 5428914 ~ 5491185 (+)
G1585375 NA other downstream 1732186 5448476 ~ 5448938 (+)

Expression


Co-expression Network