G1583985


Basic Information

Item Value
gene id G1583985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3724197 ~ 3724427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813491
aataaacaacactaacaataaaacaatctctgacaaagacatgaggggaaacagagggttaaatacacaacaggtaatgaatgggattgaaaacaggtgtgtgggaagacaagacaaaaccaatggaaaatgaaaaatggatcaatgatggctagaagaccggtgacgtcgaacgccgagcaccgcccgaacaaggagaggcaacgacttcggcagaagtcgtgacaaatg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813491 True 231 lncRNA 0.44 1 3724197 3724427

Neighbor

gene id symbol gene type direction distance location
LOC118941415 LOC106602193 coding upstream 32185 3687991 ~ 3692012 (+)
LOC110497294 LOC106602191 coding upstream 101405 3609578 ~ 3622792 (+)
LOC110497299 fgl1 coding upstream 207742 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 225466 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 231720 3483359 ~ 3492477 (+)
LOC110534570 sgcz coding downstream 188060 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 655695 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 676233 4400660 ~ 4404928 (+)
LOC118941418 LOC106602209 coding downstream 694274 4418701 ~ 4423685 (+)
LOC118941534 LOC106595337 coding downstream 711380 4435807 ~ 4442006 (+)
G1583979 NA non-coding upstream 7907 3716034 ~ 3716290 (+)
G1583958 NA non-coding upstream 64697 3658724 ~ 3659500 (+)
G1583956 NA non-coding upstream 68252 3654932 ~ 3655945 (+)
G1583953 NA non-coding upstream 77013 3644036 ~ 3647184 (+)
G1583950 NA non-coding upstream 84575 3638496 ~ 3639622 (+)
G1583990 NA non-coding downstream 1727 3726154 ~ 3726383 (+)
G1583991 NA non-coding downstream 4906 3729333 ~ 3729551 (+)
G1583994 NA non-coding downstream 10424 3734851 ~ 3735103 (+)
G1584002 NA non-coding downstream 24635 3749062 ~ 3749433 (+)
G1584213 NA non-coding downstream 61951 3786378 ~ 3786849 (+)
G1583951 NA other upstream 81321 3640649 ~ 3642876 (+)
LOC110534752 LOC106602173 other upstream 288585 3416203 ~ 3445744 (+)
G1584344 NA other downstream 338241 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 824128 4545961 ~ 4551255 (+)
G1584899 NA other downstream 1397564 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 1705870 5428914 ~ 5491185 (+)
G1585375 NA other downstream 1724049 5448476 ~ 5448938 (+)

Expression


Co-expression Network