G1584220


Basic Information

Item Value
gene id G1584220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3793148 ~ 3793391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813782
gaatgggagaaactccccaaatacagctgtgccaagtttgtagcatcatacccatgaggactcaagtctgtaatcactgccaaaggtgtttcaacaaagtactaactAAAGGGTCTGAACATTTTTGggagtaaaaatgtctaaaaaccggTTTTTGcttttcattatggggtgttttgatgtcattatggggtattgtgtgtagattgatgaggggaaaaaacgatttaatccattttagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813782 True 244 lncRNA 0.38 1 3793148 3793391

Neighbor

gene id symbol gene type direction distance location
LOC118941415 LOC106602193 coding upstream 101136 3687991 ~ 3692012 (+)
LOC110497294 LOC106602191 coding upstream 170356 3609578 ~ 3622792 (+)
LOC110497299 fgl1 coding upstream 276693 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 294417 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 300671 3483359 ~ 3492477 (+)
LOC110534570 sgcz coding downstream 119096 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 586731 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 607269 4400660 ~ 4404928 (+)
LOC118941418 LOC106602209 coding downstream 625310 4418701 ~ 4423685 (+)
LOC118941534 LOC106595337 coding downstream 642416 4435807 ~ 4442006 (+)
G1584213 NA non-coding upstream 6299 3786378 ~ 3786849 (+)
G1584002 NA non-coding upstream 43715 3749062 ~ 3749433 (+)
G1583994 NA non-coding upstream 58045 3734851 ~ 3735103 (+)
G1583991 NA non-coding upstream 63597 3729333 ~ 3729551 (+)
G1583990 NA non-coding upstream 66765 3726154 ~ 3726383 (+)
G1584234 NA non-coding downstream 17772 3811163 ~ 3815345 (+)
G1584235 NA non-coding downstream 25399 3818790 ~ 3819042 (+)
G1584240 NA non-coding downstream 34123 3827514 ~ 3831981 (+)
G1584246 NA non-coding downstream 56296 3849687 ~ 3938261 (+)
G1584254 LOC106602198 non-coding downstream 73972 3867363 ~ 3903834 (+)
G1583951 NA other upstream 150272 3640649 ~ 3642876 (+)
LOC110534752 LOC106602173 other upstream 357536 3416203 ~ 3445744 (+)
G1584344 NA other downstream 269277 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 755164 4545961 ~ 4551255 (+)
G1584899 NA other downstream 1328600 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 1636906 5428914 ~ 5491185 (+)
G1585375 NA other downstream 1655085 5448476 ~ 5448938 (+)

Expression


Co-expression Network