G1584240


Basic Information

Item Value
gene id G1584240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 3827514 ~ 3831981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1813810
atattagagaactgaggagaggagtacagtagaggactgaggagaggagtatagtagagaactgaggagaggagtatagtagagaactgaggagaggagtatagtagagaactgaggagaggagaggagtatattagagaactgaggaaaggagtacagtagagaactgaggagaggagaggagtatattagagaactgaggagaggagtacaTTAGAGAactgatgagaggagaagagtatattagagaactgaggaaaggagtacagtagagaactgaggagaggagtatagtagagaactgaggagaggaatatagtagagaactgaggagaggagtatattagagaactgaggagaggaatatattagagaactgaggagaggaatatagtagagaactgaggagaggaatatagtagagaactgaggagaggagaggcatatattagagaactgaggagaggaatatagtagagaactgaagagaggagaggaatatagtagagaactgaggagaggagaggaatatattagagaactgaggagaggaatatattagagaactgaggagaggaatatagtagagaactgaggagaggaatatagtagagaactgaggagaggagaggaatatagtagagaactgaggagaggagaggaatatagtagagaactgaggagaggagaggaatatattagagaactgaggagaggaatatagtagagaactgaggagaggagtggagtatattagagaactgaggaaaggagtacagtagagaactgaggagaggagtatattagagaactgaggagaggagtatagtagagaactgaggagaagagtatagtagagaactgaggagaggagtatagtagagaactgaggagaggagaggagtatattagagaactgaggagaggagtatattagagaactgaggagagtaatatagtagagaactgaggagaggagtatagtagagaactgaggagagggagaggagagagaagagaaggaggagggagaggagggagaagatatTTCCTCGTTTGGAAGGACAAAACGCTGAATGTATTTTCCTAAATAAGAGAGAATATAAGTGAAAGGGTCTGGGCAACATTATCTCAGGAACTCATTAGAATAAAGAGAtttggaggagaggataggagaggaggaggaaattaTGGATGTGGAGAGTGTGCGATGGACGAGAGCGAGTGATTACCAATTCTGGAGAGTGagtctccctcttctccctttgccctctctttctctctctctttctagttctCTCCATCCCGACAGGCCCTTGTGCTGTGAATGCAGCACTCTGTAATGGAACCATGTGTCTGGAGGGGGCCtgcattcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1813810 True 1378 lncRNA 0.43 4 3827514 3831981

Neighbor

gene id symbol gene type direction distance location
LOC118941415 LOC106602193 coding upstream 135502 3687991 ~ 3692012 (+)
LOC110497294 LOC106602191 coding upstream 204722 3609578 ~ 3622792 (+)
LOC110497299 fgl1 coding upstream 311059 3507304 ~ 3516455 (+)
LOC110497290 LOC106610393 coding upstream 328783 3492742 ~ 3498731 (+)
LOC110497289 LOC106610394 coding upstream 335037 3483359 ~ 3492477 (+)
LOC110534570 sgcz coding downstream 80506 3912487 ~ 4229364 (+)
LOC118941416 LOC106595337 coding downstream 548141 4380122 ~ 4385135 (+)
LOC118941417 LOC106595337 coding downstream 568679 4400660 ~ 4404928 (+)
LOC118941418 LOC106602209 coding downstream 586720 4418701 ~ 4423685 (+)
LOC118941534 LOC106595337 coding downstream 603826 4435807 ~ 4442006 (+)
G1584235 NA non-coding upstream 8472 3818790 ~ 3819042 (+)
G1584234 NA non-coding upstream 12169 3811163 ~ 3815345 (+)
G1584220 NA non-coding upstream 34123 3793148 ~ 3793391 (+)
G1584213 NA non-coding upstream 40665 3786378 ~ 3786849 (+)
G1584002 NA non-coding upstream 78081 3749062 ~ 3749433 (+)
G1584246 NA non-coding downstream 17706 3849687 ~ 3938261 (+)
G1584254 LOC106602198 non-coding downstream 35382 3867363 ~ 3903834 (+)
G1584270 NA non-coding downstream 82143 3914124 ~ 3914585 (+)
G1584275 NA non-coding downstream 89808 3921789 ~ 3998208 (+)
G1584280 NA non-coding downstream 98129 3930110 ~ 3930366 (+)
G1583951 NA other upstream 184638 3640649 ~ 3642876 (+)
LOC110534752 LOC106602173 other upstream 391902 3416203 ~ 3445744 (+)
G1584344 NA other downstream 230687 4062668 ~ 4063226 (+)
LOC110514758 LOC106595337 other downstream 716574 4545961 ~ 4551255 (+)
G1584899 NA other downstream 1290010 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 1598316 5428914 ~ 5491185 (+)
G1585375 NA other downstream 1616495 5448476 ~ 5448938 (+)

Expression


Co-expression Network