G1584698 (LOC108260735)


Basic Information

Item Value
gene id G1584698
gene name LOC108260735
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 4520917 ~ 4800849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1814316
ctctctctttagtcaggttgttgtatctggtctgtagctggtctctctcttcagtcaggttgttgtatctggtctgtagctggtctctctctttagtcaggttgttgtatctggtctgtaactggtctctctctttagtcaggatgTTGTATCTGatctgtaactggtctctctctttattcaggttgttgtatctggtctgtaactggtctctctctttagtcaggttgttgtatctggtctgtagctggtctctctctgcagttgTGTTGATTTTATAAAGGGAGAAACTCTGGAACAAGTTATTCCTTTTATCCTCAAAATCTTTGATGACTCTGTTAtagacagacaggcctatgatcccag

Function

NR:

description
PREDICTED: CD209 antigen-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1814316 True 366 lncRNA 0.42 5 4520917 4800849

Neighbor

gene id symbol gene type direction distance location
LOC110512119 LOC106595337 coding upstream 7967 4509175 ~ 4512950 (+)
LOC110514540 LOC106610365 coding upstream 67013 4451130 ~ 4453904 (+)
LOC110515142 LOC106602209 coding upstream 69840 4448502 ~ 4451077 (+)
LOC118941534 LOC106595337 coding upstream 78911 4435807 ~ 4442006 (+)
LOC118941418 LOC106602209 coding upstream 97232 4418701 ~ 4423685 (+)
LOC118941353 LOC106602209 coding downstream 9532 4810381 ~ 4813313 (+)
LOC110533207 mxd4 coding downstream 161847 4962696 ~ 5004867 (+)
LOC110497180 LOC106610322 coding downstream 224091 5024940 ~ 5027850 (+)
LOC110497170 LOC106610324 coding downstream 227860 5028709 ~ 5032688 (+)
LOC118936569 LOC106610310 coding downstream 234276 5035125 ~ 5036894 (+)
G1584731 NA non-coding upstream 33182 4486900 ~ 4487735 (+)
LOC118941417 LOC106595337 non-coding upstream 118685 4400660 ~ 4404928 (+)
G1584673 NA non-coding upstream 189536 4331083 ~ 4331381 (+)
G1584668 NA non-coding upstream 191505 4329195 ~ 4329412 (+)
G1584869 NA non-coding downstream 119944 4920793 ~ 4921499 (+)
LOC110498597 LOC106592710 non-coding downstream 281170 5069016 ~ 5084826 (+)
G1584906 LOC106610368 non-coding downstream 287960 5088809 ~ 5090649 (+)
G1584907 NA non-coding downstream 298267 5099116 ~ 5102383 (+)
G1584900 cdn2b non-coding downstream 329181 5130030 ~ 5132249 (+)
G1584344 NA other upstream 457691 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 829933 3687991 ~ 3692012 (+)
G1583951 NA other upstream 878041 3640649 ~ 3642876 (+)
LOC110497294 LOC106602191 other upstream 898129 3609578 ~ 3622792 (+)
LOC110497289 LOC106610394 other upstream 1035497 3483359 ~ 3492477 (+)
G1584899 NA other downstream 321142 5121991 ~ 5128284 (+)
LOC110497310 gstcd other downstream 629448 5428914 ~ 5491185 (+)
G1585375 NA other downstream 647627 5448476 ~ 5448938 (+)
G1585483 NA other downstream 842907 5643756 ~ 5715375 (+)
G1585804 NA other downstream 1008129 5808978 ~ 5812853 (+)

Expression


Co-expression Network