Gene
RNA
| Item | Value |
|---|---|
| gene id | G1584869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 4920793 ~ 4921499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1814520 | True | 200 | lncRNA | 0.49 | 3 | 4920793 | 4921499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941353 | LOC106602209 | coding | upstream | 107480 | 4810381 ~ 4813313 (+) |
| LOC118941424 | LOC106595337 | coding | upstream | 126556 | 4782485 ~ 4794237 (+) |
| LOC118941423 | LOC106595337 | coding | upstream | 149497 | 4763611 ~ 4771296 (+) |
| LOC118941539 | LOC106595337 | coding | upstream | 220419 | 4697782 ~ 4700374 (+) |
| LOC118941421 | LOC106595337 | coding | upstream | 252346 | 4663996 ~ 4668447 (+) |
| LOC110533207 | mxd4 | coding | downstream | 41197 | 4962696 ~ 5004867 (+) |
| LOC110497180 | LOC106610322 | coding | downstream | 103441 | 5024940 ~ 5027850 (+) |
| LOC110497170 | LOC106610324 | coding | downstream | 107210 | 5028709 ~ 5032688 (+) |
| LOC118936569 | LOC106610310 | coding | downstream | 113626 | 5035125 ~ 5036894 (+) |
| LOC110498596 | LOC106610325 | coding | downstream | 118919 | 5040418 ~ 5066495 (+) |
| G1584698 | LOC108260735 | non-coding | upstream | 119944 | 4520917 ~ 4800849 (+) |
| G1584695 | NA | non-coding | upstream | 120365 | 4356642 ~ 4800428 (+) |
| G1584797 | NA | non-coding | upstream | 124554 | 4704757 ~ 4796239 (+) |
| G1584826 | NA | non-coding | upstream | 126000 | 4794390 ~ 4794793 (+) |
| LOC118941536 | LOC106610423 | non-coding | upstream | 320983 | 4571744 ~ 4599810 (+) |
| LOC110498597 | LOC106592710 | non-coding | downstream | 160520 | 5069016 ~ 5084826 (+) |
| G1584906 | LOC106610368 | non-coding | downstream | 167310 | 5088809 ~ 5090649 (+) |
| G1584907 | NA | non-coding | downstream | 177617 | 5099116 ~ 5102383 (+) |
| G1584900 | cdn2b | non-coding | downstream | 208531 | 5130030 ~ 5132249 (+) |
| G1584932 | NA | non-coding | downstream | 230022 | 5151521 ~ 5151833 (+) |
| LOC110514758 | LOC106595337 | other | upstream | 371604 | 4545961 ~ 4551255 (+) |
| G1584344 | NA | other | upstream | 857567 | 4062668 ~ 4063226 (+) |
| LOC118941415 | LOC106602193 | other | upstream | 1229809 | 3687991 ~ 3692012 (+) |
| G1583951 | NA | other | upstream | 1277917 | 3640649 ~ 3642876 (+) |
| LOC110497294 | LOC106602191 | other | upstream | 1298005 | 3609578 ~ 3622792 (+) |
| G1584899 | NA | other | downstream | 200492 | 5121991 ~ 5128284 (+) |
| LOC110497310 | gstcd | other | downstream | 508798 | 5428914 ~ 5491185 (+) |
| G1585375 | NA | other | downstream | 526977 | 5448476 ~ 5448938 (+) |
| G1585483 | NA | other | downstream | 722257 | 5643756 ~ 5715375 (+) |
| G1585804 | NA | other | downstream | 887479 | 5808978 ~ 5812853 (+) |
