Gene
RNA
| Item | Value |
|---|---|
| gene id | G1584906 |
| gene name | LOC106610368 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5088809 ~ 5090649 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110497177 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1814569 | True | 1146 | lncRNA | 0.41 | 2 | 5088809 | 5090649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498597 | LOC106592710 | coding | upstream | 3983 | 5069016 ~ 5084826 (+) |
| LOC110498596 | LOC106610325 | coding | upstream | 22314 | 5040418 ~ 5066495 (+) |
| LOC118941425 | NA | coding | upstream | 30793 | 5056767 ~ 5058016 (+) |
| LOC118936569 | LOC106610310 | coding | upstream | 51915 | 5035125 ~ 5036894 (+) |
| LOC110497170 | LOC106610324 | coding | upstream | 56121 | 5028709 ~ 5032688 (+) |
| LOC110497175 | LOC106610327 | coding | downstream | 2939 | 5093588 ~ 5095659 (+) |
| LOC100301741 | mtap | coding | downstream | 18892 | 5109541 ~ 5115195 (+) |
| tet2 | LOC106602283 | coding | downstream | 242731 | 5333380 ~ 5390400 (+) |
| trnaa-ugc-141 | NA | coding | downstream | 303975 | 5394624 ~ 5394699 (+) |
| LOC118941427 | arhgef38 | coding | downstream | 314817 | 5405466 ~ 5424393 (+) |
| G1584869 | NA | non-coding | upstream | 167310 | 4920793 ~ 4921499 (+) |
| G1584797 | NA | non-coding | upstream | 292570 | 4704757 ~ 4796239 (+) |
| G1584826 | NA | non-coding | upstream | 294016 | 4794390 ~ 4794793 (+) |
| LOC118941536 | LOC106610423 | non-coding | upstream | 488999 | 4571744 ~ 4599810 (+) |
| G1584907 | NA | non-coding | downstream | 8467 | 5099116 ~ 5102383 (+) |
| G1584900 | cdn2b | non-coding | downstream | 39381 | 5130030 ~ 5132249 (+) |
| G1584932 | NA | non-coding | downstream | 60872 | 5151521 ~ 5151833 (+) |
| G1584934 | NA | non-coding | downstream | 66533 | 5157182 ~ 5158472 (+) |
| G1584935 | NA | non-coding | downstream | 67938 | 5158587 ~ 5159609 (+) |
| LOC110514758 | LOC106595337 | other | upstream | 539620 | 4545961 ~ 4551255 (+) |
| G1584344 | NA | other | upstream | 1025583 | 4062668 ~ 4063226 (+) |
| LOC118941415 | LOC106602193 | other | upstream | 1397825 | 3687991 ~ 3692012 (+) |
| G1583951 | NA | other | upstream | 1445933 | 3640649 ~ 3642876 (+) |
| LOC110497294 | LOC106602191 | other | upstream | 1466021 | 3609578 ~ 3622792 (+) |
| G1584899 | NA | other | downstream | 31342 | 5121991 ~ 5128284 (+) |
| LOC110497310 | gstcd | other | downstream | 339648 | 5428914 ~ 5491185 (+) |
| G1585375 | NA | other | downstream | 357827 | 5448476 ~ 5448938 (+) |
| G1585483 | NA | other | downstream | 553107 | 5643756 ~ 5715375 (+) |
| G1585804 | NA | other | downstream | 718329 | 5808978 ~ 5812853 (+) |
