Gene
RNA
| Item | Value |
|---|---|
| gene id | G1584934 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5157182 ~ 5158472 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1814597 | True | 640 | lncRNA | 0.41 | 2 | 5157182 | 5158472 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100301741 | mtap | coding | upstream | 41987 | 5109541 ~ 5115195 (+) |
| LOC110497175 | LOC106610327 | coding | upstream | 61523 | 5093588 ~ 5095659 (+) |
| LOC110498597 | LOC106592710 | coding | upstream | 72356 | 5069016 ~ 5084826 (+) |
| LOC110498596 | LOC106610325 | coding | upstream | 90687 | 5040418 ~ 5066495 (+) |
| tet2 | LOC106602283 | coding | downstream | 174908 | 5333380 ~ 5390400 (+) |
| trnaa-ugc-141 | NA | coding | downstream | 236152 | 5394624 ~ 5394699 (+) |
| LOC118941427 | arhgef38 | coding | downstream | 246994 | 5405466 ~ 5424393 (+) |
| LOC110497310 | gstcd | coding | downstream | 270442 | 5428914 ~ 5491185 (+) |
| npnta | npnt | coding | downstream | 340685 | 5499157 ~ 5560224 (+) |
| G1584932 | NA | non-coding | upstream | 5349 | 5151521 ~ 5151833 (+) |
| G1584900 | cdn2b | non-coding | upstream | 24933 | 5130030 ~ 5132249 (+) |
| G1584907 | NA | non-coding | upstream | 54799 | 5099116 ~ 5102383 (+) |
| G1584906 | LOC106610368 | non-coding | upstream | 66533 | 5088809 ~ 5090649 (+) |
| G1584935 | NA | non-coding | downstream | 115 | 5158587 ~ 5159609 (+) |
| G1584936 | NA | non-coding | downstream | 2131 | 5160603 ~ 5160972 (+) |
| G1584939 | NA | non-coding | downstream | 13031 | 5171503 ~ 5173078 (+) |
| G1584940 | NA | non-coding | downstream | 16708 | 5175180 ~ 5175414 (+) |
| G1584957 | NA | non-coding | downstream | 53616 | 5212088 ~ 5212318 (+) |
| G1584899 | NA | other | upstream | 28898 | 5121991 ~ 5128284 (+) |
| LOC110514758 | LOC106595337 | other | upstream | 607993 | 4545961 ~ 4551255 (+) |
| G1584344 | NA | other | upstream | 1093956 | 4062668 ~ 4063226 (+) |
| LOC118941415 | LOC106602193 | other | upstream | 1466198 | 3687991 ~ 3692012 (+) |
| G1583951 | NA | other | upstream | 1514306 | 3640649 ~ 3642876 (+) |
| G1585375 | NA | other | downstream | 290004 | 5448476 ~ 5448938 (+) |
| G1585483 | NA | other | downstream | 485284 | 5643756 ~ 5715375 (+) |
| G1585804 | NA | other | downstream | 650506 | 5808978 ~ 5812853 (+) |
| G1585983 | NA | other | downstream | 1011612 | 6169580 ~ 6170827 (+) |
