G1584957


Basic Information

Item Value
gene id G1584957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5212088 ~ 5212318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1814622
atggcccCTTTTCGCCTGGCATTCTTTTTGCTGCTACCTTCGGCTGAGGCAATCTGAGGGAAAATCTGCTGGCCCGGCTTTGTTTCATTGTGCCGTCGTGTAATAATTGAATCATCGCATAACTGCAATACCACAAAATCAGCCgaataaagacacacagagacagaatgagagcgagagagagagaaagagagggttaggtagaaagaaagagagggagagagaaagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1814622 True 231 lncRNA 0.46 1 5212088 5212318

Neighbor

gene id symbol gene type direction distance location
LOC100301741 mtap coding upstream 96893 5109541 ~ 5115195 (+)
LOC110497175 LOC106610327 coding upstream 116429 5093588 ~ 5095659 (+)
LOC110498597 LOC106592710 coding upstream 127262 5069016 ~ 5084826 (+)
LOC110498596 LOC106610325 coding upstream 145593 5040418 ~ 5066495 (+)
tet2 LOC106602283 coding downstream 121062 5333380 ~ 5390400 (+)
trnaa-ugc-141 NA coding downstream 182306 5394624 ~ 5394699 (+)
LOC118941427 arhgef38 coding downstream 193148 5405466 ~ 5424393 (+)
LOC110497310 gstcd coding downstream 216596 5428914 ~ 5491185 (+)
npnta npnt coding downstream 286839 5499157 ~ 5560224 (+)
G1584940 NA non-coding upstream 36674 5175180 ~ 5175414 (+)
G1584939 NA non-coding upstream 39010 5171503 ~ 5173078 (+)
G1584936 NA non-coding upstream 51116 5160603 ~ 5160972 (+)
G1584935 NA non-coding upstream 52479 5158587 ~ 5159609 (+)
G1584934 NA non-coding upstream 53616 5157182 ~ 5158472 (+)
G1585271 NA non-coding downstream 15891 5228209 ~ 5228536 (+)
G1585336 NA non-coding downstream 120461 5332779 ~ 5333082 (+)
G1585337 NA non-coding downstream 179316 5391634 ~ 5393007 (+)
G1585417 NA non-coding downstream 306199 5518517 ~ 5519050 (+)
G1585421 NA non-coding downstream 314038 5526356 ~ 5548399 (+)
G1584899 NA other upstream 83804 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 662899 4545961 ~ 4551255 (+)
G1584344 NA other upstream 1148862 4062668 ~ 4063226 (+)
LOC118941415 LOC106602193 other upstream 1521104 3687991 ~ 3692012 (+)
G1583951 NA other upstream 1569212 3640649 ~ 3642876 (+)
G1585375 NA other downstream 236158 5448476 ~ 5448938 (+)
G1585483 NA other downstream 431438 5643756 ~ 5715375 (+)
G1585804 NA other downstream 596660 5808978 ~ 5812853 (+)
G1585983 NA other downstream 957766 6169580 ~ 6170827 (+)

Expression


Co-expression Network