G1585423


Basic Information

Item Value
gene id G1585423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5534340 ~ 5535128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815225
gaCACAAAATAAGTGTGGGCTGAGGAAGCCTAACTCCtgcttttcctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctccttcctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctccctttctccttcctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctctctttctccttactCTCCGTCCCCCACGCTACCTCCTTCTGaatcctccctttctccttcctctcattctcctccctccctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctccctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctccctctctttctccttcctctccgtcCCCCACGCTACCTCCTTCtgattcctccctttctcctc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815225 True 641 lncRNA 0.56 2 5534340 5535128

Neighbor

gene id symbol gene type direction distance location
LOC110497310 gstcd coding upstream 43155 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 109947 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 139641 5394624 ~ 5394699 (+)
tet2 LOC106602283 coding upstream 143940 5333380 ~ 5390400 (+)
LOC100301741 mtap coding upstream 419145 5109541 ~ 5115195 (+)
aimp1a aimp1 coding downstream 248842 5783970 ~ 5807227 (+)
LOC118941430 LOC106602292 coding downstream 408497 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 431070 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 437218 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 587825 6122953 ~ 6151945 (+)
G1585417 NA non-coding upstream 15290 5518517 ~ 5519050 (+)
G1585337 NA non-coding upstream 141333 5391634 ~ 5393007 (+)
G1585336 NA non-coding upstream 201258 5332779 ~ 5333082 (+)
G1585271 NA non-coding upstream 305804 5228209 ~ 5228536 (+)
G1584957 NA non-coding upstream 322022 5212088 ~ 5212318 (+)
npnta npnt non-coding downstream 17731 5499157 ~ 5560224 (+)
G1585436 NA non-coding downstream 27811 5562939 ~ 5563252 (+)
G1585437 NA non-coding downstream 28853 5563981 ~ 5564311 (+)
G1585438 NA non-coding downstream 29437 5564565 ~ 5565593 (+)
G1585442 NA non-coding downstream 39965 5575093 ~ 5575794 (+)
G1585375 NA other upstream 85402 5448476 ~ 5448938 (+)
G1584899 NA other upstream 406056 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 985151 4545961 ~ 4551255 (+)
G1584344 NA other upstream 1471114 4062668 ~ 4063226 (+)
G1585483 NA other downstream 108628 5643756 ~ 5715375 (+)
G1585804 NA other downstream 273850 5808978 ~ 5812853 (+)
G1585983 NA other downstream 634956 6169580 ~ 6170827 (+)
G1586200 NA other downstream 826720 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1519717 7054845 ~ 7056469 (+)

Expression


Co-expression Network