G1585438


Basic Information

Item Value
gene id G1585438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5564565 ~ 5565593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815241
TCTACTTGTCTAGGTAGGGGTAATGAACTTGTAAAAATACAGCccagtacaacaacaaaaaacgagaCATCTACAATGCTCTGGGTAAATTTGACCCGCACTTTGACCTTTATAACTCTTGAACGGTGTGTCCTAGAAACAAGCTGCTTCCTGCACAGAGCAACGTTTATTTGAAGTGGAGTACAGGTTAAATAAAACAGAGTTGCTGACAATCTGACTTTTCCCTGAACTTTTATTCTCCGGACTAAAGATCCTGAAGCTTCTGCTCATCACATTCTGTGCATGTGTTTATTCTCTACTTTACTACAGTCCTTGCTCTGCTCTTAGAGAACAGGCTACTCTGGCGAATGGTGCTGTTTAATAAAGAtggatcaaagctgaatcaatgtctgcaagatcacataatgaACCGACTATAATAGCATAGTATTGCATTACTGTAAGACAAATTTTTGCATTTTTCTCTCATGTGGCCAAAACTTAATAGGTCCACTAGGCAAACTTGTTAACAGTATCTGCTCCACAATTCACACAATGTACATCATTCAATACAACACTGTAGGATAGTTTGAAACCCTGTATAACTCAAGAAGATCAAACTGATTGAGATGAAATGGTTGGTATGCAGATACTGCATGGATGTTTCACCGGTAAAACCTGAAGAATTATCATTCTTGATTGACAGTGAGAAATGTGAAGGGAAGGACAGCTACATTGTTTTTAGAAGAAAATGTCTGGGAAAAGTCCCATTCGCAGCCACATTTTGATAAGGGAAACTGTACTTAATGTCATTTCCAAATTGGATCAGAACATCAAACGTGTATAGCCTTTTCTAACATAATAGAAGGGTTAAGTCAAATGTTATTTATAATATTTTTGTGTCAGTTCAAGTGCAACATGTATCTAACAATTGAACCAAAGTCAATTACCTAGGTTGCATTTATTAGGGCACACCGTAGAAAAAGGCTGTAAAACATGcttcaatggaaaatgaaaacaagtggttcttattggacaagtccaggttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815241 True 1029 lncRNA 0.37 1 5564565 5565593

Neighbor

gene id symbol gene type direction distance location
npnta npnt coding upstream 4341 5499157 ~ 5560224 (+)
LOC110497310 gstcd coding upstream 73380 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 140172 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 169866 5394624 ~ 5394699 (+)
tet2 LOC106602283 coding upstream 174165 5333380 ~ 5390400 (+)
aimp1a aimp1 coding downstream 218377 5783970 ~ 5807227 (+)
LOC118941430 LOC106602292 coding downstream 378032 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 400605 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 406753 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 557360 6122953 ~ 6151945 (+)
G1585437 NA non-coding upstream 254 5563981 ~ 5564311 (+)
G1585436 NA non-coding upstream 1313 5562939 ~ 5563252 (+)
G1585421 NA non-coding upstream 16166 5526356 ~ 5548399 (+)
G1585423 NA non-coding upstream 29437 5534340 ~ 5535128 (+)
G1585442 NA non-coding downstream 9500 5575093 ~ 5575794 (+)
G1585445 NA non-coding downstream 11837 5577430 ~ 5577881 (+)
G1585475 NA non-coding downstream 61064 5626657 ~ 5652880 (+)
G1585481 NA non-coding downstream 69816 5635409 ~ 5710074 (+)
G1585514 NA non-coding downstream 150278 5715871 ~ 5718810 (+)
G1585375 NA other upstream 115627 5448476 ~ 5448938 (+)
G1584899 NA other upstream 436281 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 1015376 4545961 ~ 4551255 (+)
G1584344 NA other upstream 1501339 4062668 ~ 4063226 (+)
G1585483 NA other downstream 78163 5643756 ~ 5715375 (+)
G1585804 NA other downstream 243385 5808978 ~ 5812853 (+)
G1585983 NA other downstream 604491 6169580 ~ 6170827 (+)
G1586200 NA other downstream 796255 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1489252 7054845 ~ 7056469 (+)

Expression


Co-expression Network