G1585442


Basic Information

Item Value
gene id G1585442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5575093 ~ 5575794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815245
cagaaattactttatcaaagcaacaaaataactaaagCTTTAAAATGGTGAAAAGTTGTAGAAATGTGGAGgctaagtgggttaaaatcttcctagaagtcacagaggatgAGAATTTTTTCACGTTAACAACACTTTATTAATATAATTAGTTTTATTGAATTTTCCATGAGGTCTATTTAATATAgctttaatataacaggcttaaAAAATATCAAAGGTACACCAAAGACACTCATTTAATGGAATGACCCAGCACCGATATTATGGGCTACATTGTCATAGTGCAAAAGAGCACAAATCTTTGCAAAAAAGACCGTAAGCCTCATTATAATCTGGCAGCATGATTTACTTTGGAGGAACGAGTAGACTACAGTTTAGTAAACTGAGCAAAAATGTAGCTGCATGAACAAGCCTCCTTATAATGCACAAATCTAATTGTGCAGCCAAATTGACAGATCTTGGATTTTTTTTCACCACAAAACTCAAGAGACCTGTACACAAACTACCTGTGAACGATGTCCCACAACCTGAGTCCATCATCCCTGTAGAGGAAGTTGGGGATTGACTCCAGACCACGTGCTGTGATGTCCTCCGGCATACAGAGGGAGCTGTAGGTCAATGAGGCCACAGCTTTCTTCAGGAACTCCATCATCCCTGGACCTCCGACACTGGCATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815245 True 679 lncRNA 0.39 2 5575093 5575794

Neighbor

gene id symbol gene type direction distance location
npnta npnt coding upstream 14869 5499157 ~ 5560224 (+)
LOC110497310 gstcd coding upstream 83908 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 150700 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 180394 5394624 ~ 5394699 (+)
tet2 LOC106602283 coding upstream 184693 5333380 ~ 5390400 (+)
aimp1a aimp1 coding downstream 208176 5783970 ~ 5807227 (+)
LOC118941430 LOC106602292 coding downstream 367831 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 390404 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 396552 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 547159 6122953 ~ 6151945 (+)
G1585438 NA non-coding upstream 9500 5564565 ~ 5565593 (+)
G1585437 NA non-coding upstream 10782 5563981 ~ 5564311 (+)
G1585436 NA non-coding upstream 11841 5562939 ~ 5563252 (+)
G1585421 NA non-coding upstream 26694 5526356 ~ 5548399 (+)
G1585445 NA non-coding downstream 1636 5577430 ~ 5577881 (+)
G1585475 NA non-coding downstream 50863 5626657 ~ 5652880 (+)
G1585481 NA non-coding downstream 59615 5635409 ~ 5710074 (+)
G1585514 NA non-coding downstream 140077 5715871 ~ 5718810 (+)
G1585529 NA non-coding downstream 167527 5743321 ~ 5743542 (+)
G1585375 NA other upstream 126155 5448476 ~ 5448938 (+)
G1584899 NA other upstream 446809 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 1025904 4545961 ~ 4551255 (+)
G1584344 NA other upstream 1511867 4062668 ~ 4063226 (+)
G1585483 NA other downstream 67962 5643756 ~ 5715375 (+)
G1585804 NA other downstream 233184 5808978 ~ 5812853 (+)
G1585983 NA other downstream 594290 6169580 ~ 6170827 (+)
G1586200 NA other downstream 786054 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1479051 7054845 ~ 7056469 (+)

Expression


Co-expression Network