Gene
RNA
| Item | Value |
|---|---|
| gene id | G1585445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5577430 ~ 5577881 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| arachidonate 15-lipoxygenase B-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1815248 | True | 452 | lncRNA | 0.37 | 1 | 5577430 | 5577881 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| npnta | npnt | coding | upstream | 17206 | 5499157 ~ 5560224 (+) |
| LOC110497310 | gstcd | coding | upstream | 86245 | 5428914 ~ 5491185 (+) |
| LOC118941427 | arhgef38 | coding | upstream | 153037 | 5405466 ~ 5424393 (+) |
| trnaa-ugc-141 | NA | coding | upstream | 182731 | 5394624 ~ 5394699 (+) |
| tet2 | LOC106602283 | coding | upstream | 187030 | 5333380 ~ 5390400 (+) |
| aimp1a | aimp1 | coding | downstream | 206089 | 5783970 ~ 5807227 (+) |
| LOC118941430 | LOC106602292 | coding | downstream | 365744 | 5943625 ~ 5966079 (+) |
| LOC110497324 | LOC106602293 | coding | downstream | 388317 | 5966198 ~ 5973479 (+) |
| LOC110497328 | hadh | coding | downstream | 394465 | 5972346 ~ 5975764 (+) |
| LOC110497334 | LOC106610305 | coding | downstream | 545072 | 6122953 ~ 6151945 (+) |
| G1585442 | NA | non-coding | upstream | 1636 | 5575093 ~ 5575794 (+) |
| G1585438 | NA | non-coding | upstream | 11837 | 5564565 ~ 5565593 (+) |
| G1585437 | NA | non-coding | upstream | 13119 | 5563981 ~ 5564311 (+) |
| G1585436 | NA | non-coding | upstream | 14178 | 5562939 ~ 5563252 (+) |
| G1585475 | NA | non-coding | downstream | 48776 | 5626657 ~ 5652880 (+) |
| G1585481 | NA | non-coding | downstream | 57528 | 5635409 ~ 5710074 (+) |
| G1585514 | NA | non-coding | downstream | 137990 | 5715871 ~ 5718810 (+) |
| G1585529 | NA | non-coding | downstream | 165440 | 5743321 ~ 5743542 (+) |
| G1585560 | NA | non-coding | downstream | 226878 | 5804759 ~ 5805822 (+) |
| G1585375 | NA | other | upstream | 128492 | 5448476 ~ 5448938 (+) |
| G1584899 | NA | other | upstream | 449146 | 5121991 ~ 5128284 (+) |
| LOC110514758 | LOC106595337 | other | upstream | 1028241 | 4545961 ~ 4551255 (+) |
| G1584344 | NA | other | upstream | 1514204 | 4062668 ~ 4063226 (+) |
| G1585483 | NA | other | downstream | 65875 | 5643756 ~ 5715375 (+) |
| G1585804 | NA | other | downstream | 231097 | 5808978 ~ 5812853 (+) |
| G1585983 | NA | other | downstream | 592203 | 6169580 ~ 6170827 (+) |
| G1586200 | NA | other | downstream | 783967 | 6361848 ~ 6362312 (+) |
| G1586672 | NA | other | downstream | 1476964 | 7054845 ~ 7056469 (+) |
