G1585529


Basic Information

Item Value
gene id G1585529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5743321 ~ 5743542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815332
CATTAGGTTCTGCGGGTGTATTTTATTCACTTAACTGTCCAGTCATTGAATCGGTGGGAGACACTCAATGCTTTAAGACCTCTGAGCGTATATAACCACGCAGAGTTGGACTAAAACCAGCCATTCAGTTTTCCTGTGTCTTATcctattgtACACTTTTAAAGTGTTCgttttcatcagctgttgtacaataggATAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815332 True 202 lncRNA 0.40 2 5743321 5743542

Neighbor

gene id symbol gene type direction distance location
npnta npnt coding upstream 183097 5499157 ~ 5560224 (+)
LOC110497310 gstcd coding upstream 252136 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 318928 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 348622 5394624 ~ 5394699 (+)
tet2 LOC106602283 coding upstream 352921 5333380 ~ 5390400 (+)
aimp1a aimp1 coding downstream 40428 5783970 ~ 5807227 (+)
LOC118941430 LOC106602292 coding downstream 200083 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 222656 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 228804 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 379411 6122953 ~ 6151945 (+)
G1585514 NA non-coding upstream 24511 5715871 ~ 5718810 (+)
G1585481 NA non-coding upstream 33247 5635409 ~ 5710074 (+)
G1585475 NA non-coding upstream 90441 5626657 ~ 5652880 (+)
G1585445 NA non-coding upstream 165440 5577430 ~ 5577881 (+)
G1585442 NA non-coding upstream 167527 5575093 ~ 5575794 (+)
G1585560 NA non-coding downstream 61217 5804759 ~ 5805822 (+)
G1585839 dkk2 non-coding downstream 103256 5846798 ~ 5849295 (+)
G1585848 NA non-coding downstream 124345 5867887 ~ 5868101 (+)
G1585882 NA non-coding downstream 164141 5907683 ~ 5909339 (+)
G1585891 papss1 non-coding downstream 186332 5929874 ~ 5941071 (+)
G1585483 NA other upstream 27946 5643756 ~ 5715375 (+)
G1585375 NA other upstream 294383 5448476 ~ 5448938 (+)
G1584899 NA other upstream 615037 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 1194132 4545961 ~ 4551255 (+)
G1585804 NA other downstream 65436 5808978 ~ 5812853 (+)
G1585983 NA other downstream 426542 6169580 ~ 6170827 (+)
G1586200 NA other downstream 618306 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1311303 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2996002 8739544 ~ 8844780 (+)

Expression


Co-expression Network