G1585804


Basic Information

Item Value
gene id G1585804
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5808978 ~ 5812853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815626
CATCTCATCAGTTGGTCATGCGTAAATGAGAAAGATAATTGTTTTTTTTGGAAAGGATTTCATATGCGTAATTGAAATGGTGGAAATCTGACAGTATCTCAGAAGTCAAAACCATCcttctacaattttgtttccaATGCCCTCAAAAACATTATCTCACGTCTCACCCACAACATTTCACTCAAAGCAACAGATCTGAAAGGACTTGATAGGTGGTGGGAAAAACCTGTTCATATATCAGTAGTTACgaagagaagaaggggagagTATTGGAGAGCAGTGTTGCTGTTATTTCATTTTTATGGCAGTTATAGTCATTGCTGATATGTTGGGAATTTGTGTTACACTAAATATCTGTCTTTACCTGGTAACTAATTATCCATTTTCCTATTGGCAAATGCTTTAATTGTGTAGGGTTTAGCTTTATTGATACAGGAAGTGAGACAGTTCTAGTTCCGGTGGCTGCTGGAGTTCAATGTGGTTTGACCGTTAAAGCTGCTGAATAGTTATCCATCTCCACCCAGTCCTTGCTCCTACAGAAAGTCATCCTGCACCTGTACTCAAACCCTCAACTTACTTGGTGATGGAGACAGTGAACCATTCCTATCTAATTCCTCCACTTACTGTATGTCTGACGGCTATGATGACAGCTATAAGGACGGCTATGATCACGGTTATGATAATGGCTATGATGACGGTTATGATAATGGCTATGATGACGGTTATGATGATGGCTATGAGGACGGctttgatggcggttatgatgatGGCTATGATGACAGCTTTGATGATGGTTATAAGGACAGCTTTGATAGCGGTTATAATGATGGCTATGATGACAGCTATAatggggaagggaaaggggatacctagtcagtcatacgcatttaacccaacccctctgaatcagaatcagccttaatcgacatccacgtcatccgtgcccggggagcagttgttgttgggggtttaCTGCCATGCTCAAGGGCAGAGCGTCAGATTTTTCCACTTTGCCGGCACAGACTAGCAAcccttcggttactggcctaacactcttaaccgctaggctacctgacagcTATGACTGGAAAActtcagttagctttgtAAACATGTCAGCACCTAGCATGTCCATGCTAGCACAAGTTACTCAACCATTGGCTTAAAGCTGAAACTTCCTAACAGCGGTAAAGTGCGTGAGGACTGTCTCTCCTTTTTCAACACCATCGGACTGTTCGTTGGGACCAGTTGAGGTGTGACAATCATCGTGTCGTGAAAAAGTGTTAATTCATCCAGTTCAGTTGACTACCTTTTCAATATTGCGTgatttgatgtgatgtgatgcgAAGAAAATCGAATGTAAGTTAATGTGTTCCTGATTACTTCAAGACCTGTTGGATAATGTGTCAATGTGATGAATGGCTTGTTTTGGTTTCTGAAATGAATTATAATCTCTTGATTCCATGTTATCCTTTTGCTTGTGTTATGTAGTGAGAAAATCACTCAATGCCCATTTGCTTTCCCTGTTAGTATGTACACTGACCTCATCCAGACTTatattgcgtcccaaatggcaccctattccctacatagtgcactacttttgaccagcgcatgtggtcaaaagtggtgcactatatagggaatagggttccatttgggatgcaacccctAATGTATAATCTCTGTGCTACATTCTTGTTGCACCGCACAACCACACTACAGTGTCACATGCCCCAGATTGTAGTAACCCCTAAATGCCATTATGTTTTAACTATGACACCGAAGATTGTGGACCTGGGTTCAAATTGTGTTTGAGAGATCTCAAAGTGTTCAATTGATGATCAACAACACAGGAAGAGGGATCAAATGCCAACTGAAACTGTCAGGGGAGAGATACTCCATTTTCATCTGTAGTAGTAAAAAGCGATAACCTCTTTTCTTTGGCAAATGCAAGAAAGACTTGGTCCATGAACAGTTCTAGAATCTGTGAGCGGCACAATTTACACCGTTCTGAGGGCTCCTCCACGTCTACTTTGTGGTAGAAATGCTATACATTTCTCTTTGGATGTGTTAACTGAGTATCTTCTATCCAAACCTGGCAGGGCAGAGTAGGGATGTTTTGGCAGTCACTGCACCTTGGATGAGTCGACTATGATTTGGAGGGCCAATCATCATTTCTATCTTCATTATTTTCAATGGTTTCTTTTTGATGAAAGCGCTAGCATTAAAAAGTCTTCTGGATCGAAGGAA

Function

NR:

description
PREDICTED: dematin isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815626 True 2253 TUCP 0.42 2 5808978 5812853

Neighbor

gene id symbol gene type direction distance location
aimp1a aimp1 coding upstream 1751 5783970 ~ 5807227 (+)
npnta npnt coding upstream 248754 5499157 ~ 5560224 (+)
LOC110497310 gstcd coding upstream 317793 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 384585 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 414279 5394624 ~ 5394699 (+)
LOC118941430 LOC106602292 coding downstream 130772 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 153345 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 159493 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 310100 6122953 ~ 6151945 (+)
LOC110497332 LOC106610302 coding downstream 393440 6206293 ~ 6222302 (+)
G1585560 NA non-coding upstream 3156 5804759 ~ 5805822 (+)
G1585529 NA non-coding upstream 65436 5743321 ~ 5743542 (+)
G1585514 NA non-coding upstream 90168 5715871 ~ 5718810 (+)
G1585481 NA non-coding upstream 98904 5635409 ~ 5710074 (+)
G1585475 NA non-coding upstream 156098 5626657 ~ 5652880 (+)
G1585839 dkk2 non-coding downstream 33945 5846798 ~ 5849295 (+)
G1585848 NA non-coding downstream 55034 5867887 ~ 5868101 (+)
G1585882 NA non-coding downstream 94830 5907683 ~ 5909339 (+)
G1585891 papss1 non-coding downstream 117021 5929874 ~ 5941071 (+)
G1585922 NA non-coding downstream 178122 5990975 ~ 5992041 (+)
G1585483 NA other upstream 93603 5643756 ~ 5715375 (+)
G1585375 NA other upstream 360040 5448476 ~ 5448938 (+)
G1584899 NA other upstream 680694 5121991 ~ 5128284 (+)
LOC110514758 LOC106595337 other upstream 1259789 4545961 ~ 4551255 (+)
G1585983 NA other downstream 357231 6169580 ~ 6170827 (+)
G1586200 NA other downstream 548995 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1241992 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2926691 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 3088133 8900986 ~ 8947363 (+)

Expression


Co-expression Network