G1585839 (dkk2)


Basic Information

Item Value
gene id G1585839
gene name dkk2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 5846798 ~ 5849295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815663
ACATTCTTTATTTATTCATCCATCACTGTAAATGCACAGAAAATATCTGCTGAAAACAGTAGGACAGTGACATTTGCCTCAATGCGGTCGTATTCGTGGCTTATTGGGTGTGTGGCTTTCAGTTACTTATTTTTGGCCACCCCATCCCATGAAAGTGAATGTCATTCCAGTTCATATGAACGTCATTCCAGTGCACTGCTTGCTATGAAGTCTATCTGATTGTGTTTGCATCTTTAGGTAAAAATACCAATAATGTCCCGTTTGGAACACTGACAAGTAGAGAGCCTATAAACACCGCACAATCTGATTGGGCCCAAGCCCACCCAGGACCACCAGTGCCTACGCGGCAGGCTTGAACTAACCTTGCTGCAATGTCCCCTTTTAATCATCTCACCTCGTCCTTTTTGTTGTTACCTTAATATCTTTCTAATGTTTATTATTATCTGTACATGATATACATTGATTCTTAAATACAATTTCAATTGTTTCCACATTATATACAATATAAGAGCTTATTGACGTTAGAAAACTGGTGGAAATGGTGCCTGGAAAACaaatggaaaacaaaatggaggtCCATATTATTGCATTGACTATGTACTGTAGGGAACAACTGGTTAAGTTTAACATTGAAAATCATCTAATGTGAAAAACAATGAGCAGGTCGGTACACTGTACATCCAGTAAGACGTGTGAAAAGTTCAATTGAATACAGATCGCAAATGTGGGGGGAAAGACCAAAAGGTTATTGGGCATATTTGCAATTGCAGTAATATTTTCAGAATTTATAAGTAGTAGTAACAGATAAAACCACGTGTTCAATATGTCCTGATTGAATTCCTGGATTCCTGGTTGTGGTCTCAGCTCCAGTCATATGGATGTCATTTGGGGACGAGAGGCACTTTGGGGTCTGGTATCAGTTCTACACCACTGACCCTCCAGTCCTGTGGTTGAACCAATCAAACTGAATCTCTTTGGATTCTAGCCTGCAATCAAACTGAATATGTTTGGATTCTAGCCTGGATTCTATCAAAATCTAGAAAACTAAACATGTTTGGATTCCAGGCTCTTAATAGCCTTACTATGGCATACGTCTACACTTAGACTCAACTGAGACAAATCCAGGCTAGTTCTCAACCCAAATGAACACGAATGCGAGATTCCGGAGTggtgcctgagacagcattttccaccaccatcaacaaaacaccaaatgatggaatttcttgtggaagaatgaagtcacatccctccaatagagttccagacacttgtcaAATCTATGCCGAGGTgcactgaagctgttctggctcaacGACCTATTgaaacactttatgttggtgtttcctttattttggcagtaacCTGTATATCTATGTTCATAATCTATGCAAAACATATATGCTTTCTGTTCTTTACTAGCATGGTTGAGCCCACATGTTGGTTTGAGAGTCATTGTTACTGTAGGCGACTATTCGTTTGGAGATTCCCACATTGGTTACGCTATTGGAGTGAACGCTCCAAATATAATCAGAATAGTGAGATTACAATAGTGCTTGTATCGGTTAGCTGGGGTTCTGTCATTCCCTTAGTGTGAAAATATCATACGTGAAATATGTGCCAAAAACAAACATAACTAGTAAACCAAGGGTGCATCACAGCAGTCTTGCCTTCATAAGGATAGATAGGAAGATGTTTCTATGCCATTGGTTAATGATGGCTGTAATAAAGATATGTCTTTTCTTTTCATGATGTGAAAATATATGCAACATTTTAAGGAACTTGTACATAAAACACATCCAACTTTGTGAAGAGCCTTCGACATAAAGAAGTTAGTTTGCATAAAGTCCTCGAGAACCCGCTGAACAACTTAAGGATGAATGCAACAGTCTCAGAACTCTGCGAGAATGTTCTGAGCTGGAACACAACCAAACAGGAAGGATCATACATGGAACGGTGCCAAATGCTCTCAGAAAAACCTCCTTCTTTGCTTGAGTTTGCTGGGTATCAACCAGCCCTCAGcatcttccattctctctctcaatctctctttcccagtctctCATCTCATGTCATCTCCTGGTTCTCCTCCTCCGAAAGCAGGTcggaggaagacaaagagaaaGGCCTCGGCGGACAGCCCTGCCTCACCCTTCAGATCCTCTGGCACATGTGAAGCCTGgacttggaggaggaggtggcgtCCTTCCAGACCTTGCAGGAGAGACCCTTGGCACAGTCGCAGCGCTGGAATATCTCCAGGCCGTGGGAGCCCTTCTTCCTCTGCTTGGTGCACACCTCGCCCTGCCGCAGCACCGGTTTGCAGATCTTGGTCCAGAAGTGGCGAGCGCAGCAGTAGCCCACGGAGCAGTCCGACGAGCGCAGGCACGGGTCGCC

Function

symbol description
dkk2 Predicted to enable co-receptor binding activity and receptor antagonist activity. Acts upstream of or within liver development and neuromast development. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in lateral plate mesoderm; midbrain hindbrain boundary; otic vesicle; and sensory system. Orthologous to human DKK2 (dickkopf WNT signaling pathway inhibitor 2).

NR:

description
PREDICTED: dickkopf-related protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815663 True 2397 lncRNA 0.43 2 5846798 5849295

Neighbor

gene id symbol gene type direction distance location
aimp1a aimp1 coding upstream 39571 5783970 ~ 5807227 (+)
npnta npnt coding upstream 286574 5499157 ~ 5560224 (+)
LOC110497310 gstcd coding upstream 355613 5428914 ~ 5491185 (+)
LOC118941427 arhgef38 coding upstream 422405 5405466 ~ 5424393 (+)
trnaa-ugc-141 NA coding upstream 452099 5394624 ~ 5394699 (+)
LOC118941430 LOC106602292 coding downstream 94330 5943625 ~ 5966079 (+)
LOC110497324 LOC106602293 coding downstream 116903 5966198 ~ 5973479 (+)
LOC110497328 hadh coding downstream 123051 5972346 ~ 5975764 (+)
LOC110497334 LOC106610305 coding downstream 273658 6122953 ~ 6151945 (+)
LOC110497332 LOC106610302 coding downstream 356998 6206293 ~ 6222302 (+)
G1585560 NA non-coding upstream 40976 5804759 ~ 5805822 (+)
G1585529 NA non-coding upstream 103256 5743321 ~ 5743542 (+)
G1585514 NA non-coding upstream 127988 5715871 ~ 5718810 (+)
G1585481 NA non-coding upstream 136724 5635409 ~ 5710074 (+)
G1585475 NA non-coding upstream 193918 5626657 ~ 5652880 (+)
G1585848 NA non-coding downstream 18592 5867887 ~ 5868101 (+)
G1585882 NA non-coding downstream 58388 5907683 ~ 5909339 (+)
G1585891 papss1 non-coding downstream 80579 5929874 ~ 5941071 (+)
G1585922 NA non-coding downstream 141680 5990975 ~ 5992041 (+)
G1585923 lef1 non-coding downstream 145118 5994413 ~ 5995647 (+)
G1585804 NA other upstream 33945 5808978 ~ 5812853 (+)
G1585483 NA other upstream 131423 5643756 ~ 5715375 (+)
G1585375 NA other upstream 397860 5448476 ~ 5448938 (+)
G1584899 NA other upstream 718514 5121991 ~ 5128284 (+)
G1585983 NA other downstream 320789 6169580 ~ 6170827 (+)
G1586200 NA other downstream 512553 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1205550 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2890249 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 3051691 8900986 ~ 8947363 (+)

Expression


Co-expression Network