Gene
RNA
| Item | Value |
|---|---|
| gene id | G1585848 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5867887 ~ 5868101 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1815672 | True | 215 | lncRNA | 0.47 | 1 | 5867887 | 5868101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aimp1a | aimp1 | coding | upstream | 60660 | 5783970 ~ 5807227 (+) |
| npnta | npnt | coding | upstream | 307663 | 5499157 ~ 5560224 (+) |
| LOC110497310 | gstcd | coding | upstream | 376702 | 5428914 ~ 5491185 (+) |
| LOC118941427 | arhgef38 | coding | upstream | 443494 | 5405466 ~ 5424393 (+) |
| trnaa-ugc-141 | NA | coding | upstream | 473188 | 5394624 ~ 5394699 (+) |
| LOC118941430 | LOC106602292 | coding | downstream | 75524 | 5943625 ~ 5966079 (+) |
| LOC110497324 | LOC106602293 | coding | downstream | 98097 | 5966198 ~ 5973479 (+) |
| LOC110497328 | hadh | coding | downstream | 104245 | 5972346 ~ 5975764 (+) |
| LOC110497334 | LOC106610305 | coding | downstream | 254852 | 6122953 ~ 6151945 (+) |
| LOC110497332 | LOC106610302 | coding | downstream | 338192 | 6206293 ~ 6222302 (+) |
| G1585839 | dkk2 | non-coding | upstream | 18592 | 5846798 ~ 5849295 (+) |
| G1585560 | NA | non-coding | upstream | 62065 | 5804759 ~ 5805822 (+) |
| G1585529 | NA | non-coding | upstream | 124345 | 5743321 ~ 5743542 (+) |
| G1585514 | NA | non-coding | upstream | 149077 | 5715871 ~ 5718810 (+) |
| G1585481 | NA | non-coding | upstream | 157813 | 5635409 ~ 5710074 (+) |
| G1585882 | NA | non-coding | downstream | 39582 | 5907683 ~ 5909339 (+) |
| G1585891 | papss1 | non-coding | downstream | 61773 | 5929874 ~ 5941071 (+) |
| G1585922 | NA | non-coding | downstream | 122874 | 5990975 ~ 5992041 (+) |
| G1585923 | lef1 | non-coding | downstream | 126312 | 5994413 ~ 5995647 (+) |
| G1585939 | NA | non-coding | downstream | 174933 | 6043034 ~ 6043288 (+) |
| G1585804 | NA | other | upstream | 55034 | 5808978 ~ 5812853 (+) |
| G1585483 | NA | other | upstream | 152512 | 5643756 ~ 5715375 (+) |
| G1585375 | NA | other | upstream | 418949 | 5448476 ~ 5448938 (+) |
| G1584899 | NA | other | upstream | 739603 | 5121991 ~ 5128284 (+) |
| G1585983 | NA | other | downstream | 301983 | 6169580 ~ 6170827 (+) |
| G1586200 | NA | other | downstream | 493747 | 6361848 ~ 6362312 (+) |
| G1586672 | NA | other | downstream | 1186744 | 7054845 ~ 7056469 (+) |
| G1587727 | LOC106598223 | other | downstream | 2871443 | 8739544 ~ 8844780 (+) |
| G1587790 | LOC106610525 | other | downstream | 3032885 | 8900986 ~ 8947363 (+) |
