Gene
RNA
| Item | Value |
|---|---|
| gene id | G1585922 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 5990975 ~ 5992041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1815754 | True | 1043 | lncRNA | 0.41 | 2 | 5990975 | 5992041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497328 | hadh | coding | upstream | 15211 | 5972346 ~ 5975764 (+) |
| LOC110497324 | LOC106602293 | coding | upstream | 17496 | 5966198 ~ 5973479 (+) |
| LOC118941430 | LOC106602292 | coding | upstream | 24896 | 5943625 ~ 5966079 (+) |
| aimp1a | aimp1 | coding | upstream | 183748 | 5783970 ~ 5807227 (+) |
| npnta | npnt | coding | upstream | 430751 | 5499157 ~ 5560224 (+) |
| LOC110497334 | LOC106610305 | coding | downstream | 130912 | 6122953 ~ 6151945 (+) |
| LOC110497332 | LOC106610302 | coding | downstream | 214252 | 6206293 ~ 6222302 (+) |
| LOC118941431 | NA | coding | downstream | 294140 | 6286181 ~ 6288416 (+) |
| LOC118941432 | NA | coding | downstream | 300028 | 6292069 ~ 6294461 (+) |
| sclt1 | sclt1 | coding | downstream | 1568369 | 7560410 ~ 7575349 (+) |
| G1585891 | papss1 | non-coding | upstream | 49904 | 5929874 ~ 5941071 (+) |
| G1585882 | NA | non-coding | upstream | 81636 | 5907683 ~ 5909339 (+) |
| G1585848 | NA | non-coding | upstream | 122874 | 5867887 ~ 5868101 (+) |
| G1585839 | dkk2 | non-coding | upstream | 141680 | 5846798 ~ 5849295 (+) |
| G1585560 | NA | non-coding | upstream | 185153 | 5804759 ~ 5805822 (+) |
| G1585923 | lef1 | non-coding | downstream | 2372 | 5994413 ~ 5995647 (+) |
| G1585939 | NA | non-coding | downstream | 50993 | 6043034 ~ 6043288 (+) |
| G1585940 | NA | non-coding | downstream | 53673 | 6045714 ~ 6045993 (+) |
| G1585947 | NA | non-coding | downstream | 90859 | 6082900 ~ 6083157 (+) |
| G1585964 | NA | non-coding | downstream | 130171 | 6122212 ~ 6122422 (+) |
| G1585804 | NA | other | upstream | 178122 | 5808978 ~ 5812853 (+) |
| G1585483 | NA | other | upstream | 275600 | 5643756 ~ 5715375 (+) |
| LOC110497310 | gstcd | other | upstream | 499828 | 5428914 ~ 5491185 (+) |
| G1585375 | NA | other | upstream | 542037 | 5448476 ~ 5448938 (+) |
| G1584899 | NA | other | upstream | 862691 | 5121991 ~ 5128284 (+) |
| G1585983 | NA | other | downstream | 178043 | 6169580 ~ 6170827 (+) |
| G1586200 | NA | other | downstream | 369807 | 6361848 ~ 6362312 (+) |
| G1586672 | NA | other | downstream | 1062804 | 7054845 ~ 7056469 (+) |
| G1587727 | LOC106598223 | other | downstream | 2747503 | 8739544 ~ 8844780 (+) |
| G1587790 | LOC106610525 | other | downstream | 2908945 | 8900986 ~ 8947363 (+) |
