G1585939


Basic Information

Item Value
gene id G1585939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6043034 ~ 6043288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815771
ATaaagctgcaagtctcttgggatatgtctctataagcttggcacatctagccactgggatttttgcccatttttcAATGAAAAACTGctctagctccttcaagttggatgggttccgctggtgtacagcaatctttaagtcataccacagattctcaattagattgaggtctgggctttgactaggccattccaagacatttaaatgtttcccctttaaccactcaagtgttgctttagcagtatgtttagggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815771 True 255 lncRNA 0.42 1 6043034 6043288

Neighbor

gene id symbol gene type direction distance location
LOC110497328 hadh coding upstream 67270 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 69555 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 76955 5943625 ~ 5966079 (+)
aimp1a aimp1 coding upstream 235807 5783970 ~ 5807227 (+)
npnta npnt coding upstream 482810 5499157 ~ 5560224 (+)
LOC110497334 LOC106610305 coding downstream 79665 6122953 ~ 6151945 (+)
LOC110497332 LOC106610302 coding downstream 163005 6206293 ~ 6222302 (+)
LOC118941431 NA coding downstream 242893 6286181 ~ 6288416 (+)
LOC118941432 NA coding downstream 248781 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1517122 7560410 ~ 7575349 (+)
G1585923 lef1 non-coding upstream 47387 5994413 ~ 5995647 (+)
G1585922 NA non-coding upstream 50993 5990975 ~ 5992041 (+)
G1585891 papss1 non-coding upstream 101963 5929874 ~ 5941071 (+)
G1585882 NA non-coding upstream 133695 5907683 ~ 5909339 (+)
G1585848 NA non-coding upstream 174933 5867887 ~ 5868101 (+)
G1585940 NA non-coding downstream 2426 6045714 ~ 6045993 (+)
G1585947 NA non-coding downstream 39612 6082900 ~ 6083157 (+)
G1585964 NA non-coding downstream 78924 6122212 ~ 6122422 (+)
G1585975 NA non-coding downstream 113149 6156437 ~ 6156637 (+)
G1585978 NA non-coding downstream 117033 6160321 ~ 6160543 (+)
G1585804 NA other upstream 230181 5808978 ~ 5812853 (+)
G1585483 NA other upstream 327659 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 551887 5428914 ~ 5491185 (+)
G1585375 NA other upstream 594096 5448476 ~ 5448938 (+)
G1584899 NA other upstream 914750 5121991 ~ 5128284 (+)
G1585983 NA other downstream 126796 6169580 ~ 6170827 (+)
G1586200 NA other downstream 318560 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1011557 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2696256 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2857698 8900986 ~ 8947363 (+)

Expression


Co-expression Network