G1585940


Basic Information

Item Value
gene id G1585940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6045714 ~ 6045993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815772
ctctctctctctctctccctccctctctctctctctctctctctctctctctctgtttctgtctctctctctctctccctccctccctctctctctctctctctctctctctgtctctctctccctccctctctctctctctctctctctctctctctctgtctctgtctctccctctctctctctccctctttctctctctccctctttctctctctctctgtctctctctctctctctccctctctctctctggctctctctctctctctgtctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815772 True 280 lncRNA 0.53 1 6045714 6045993

Neighbor

gene id symbol gene type direction distance location
LOC110497328 hadh coding upstream 69950 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 72235 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 79635 5943625 ~ 5966079 (+)
aimp1a aimp1 coding upstream 238487 5783970 ~ 5807227 (+)
npnta npnt coding upstream 485490 5499157 ~ 5560224 (+)
LOC110497334 LOC106610305 coding downstream 76960 6122953 ~ 6151945 (+)
LOC110497332 LOC106610302 coding downstream 160300 6206293 ~ 6222302 (+)
LOC118941431 NA coding downstream 240188 6286181 ~ 6288416 (+)
LOC118941432 NA coding downstream 246076 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1514417 7560410 ~ 7575349 (+)
G1585939 NA non-coding upstream 2426 6043034 ~ 6043288 (+)
G1585923 lef1 non-coding upstream 50067 5994413 ~ 5995647 (+)
G1585922 NA non-coding upstream 53673 5990975 ~ 5992041 (+)
G1585891 papss1 non-coding upstream 104643 5929874 ~ 5941071 (+)
G1585882 NA non-coding upstream 136375 5907683 ~ 5909339 (+)
G1585947 NA non-coding downstream 36907 6082900 ~ 6083157 (+)
G1585964 NA non-coding downstream 76219 6122212 ~ 6122422 (+)
G1585975 NA non-coding downstream 110444 6156437 ~ 6156637 (+)
G1585978 NA non-coding downstream 114328 6160321 ~ 6160543 (+)
G1585979 NA non-coding downstream 115003 6160996 ~ 6161223 (+)
G1585804 NA other upstream 232861 5808978 ~ 5812853 (+)
G1585483 NA other upstream 330339 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 554567 5428914 ~ 5491185 (+)
G1585375 NA other upstream 596776 5448476 ~ 5448938 (+)
G1584899 NA other upstream 917430 5121991 ~ 5128284 (+)
G1585983 NA other downstream 124091 6169580 ~ 6170827 (+)
G1586200 NA other downstream 315855 6361848 ~ 6362312 (+)
G1586672 NA other downstream 1008852 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2693551 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2854993 8900986 ~ 8947363 (+)

Expression


Co-expression Network