Gene
RNA
| Item | Value |
|---|---|
| gene id | G1585982 |
| gene name | LOC106610304 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 6168507 ~ 6169088 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: group XIIA secretory phospholipase A2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1815817 | True | 582 | lncRNA | 0.42 | 1 | 6168507 | 6169088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497334 | LOC106610305 | coding | upstream | 16562 | 6122953 ~ 6151945 (+) |
| LOC110497328 | hadh | coding | upstream | 192743 | 5972346 ~ 5975764 (+) |
| LOC110497324 | LOC106602293 | coding | upstream | 195028 | 5966198 ~ 5973479 (+) |
| LOC118941430 | LOC106602292 | coding | upstream | 202428 | 5943625 ~ 5966079 (+) |
| aimp1a | aimp1 | coding | upstream | 361280 | 5783970 ~ 5807227 (+) |
| LOC110497332 | LOC106610302 | coding | downstream | 37205 | 6206293 ~ 6222302 (+) |
| LOC118941431 | NA | coding | downstream | 117093 | 6286181 ~ 6288416 (+) |
| LOC118941432 | NA | coding | downstream | 122981 | 6292069 ~ 6294461 (+) |
| sclt1 | sclt1 | coding | downstream | 1391322 | 7560410 ~ 7575349 (+) |
| LOC110516931 | dnah6 | coding | downstream | 1406394 | 7575482 ~ 7766837 (+) |
| G1585976 | NA | non-coding | upstream | 1840 | 6164513 ~ 6166667 (+) |
| G1585979 | NA | non-coding | upstream | 7284 | 6160996 ~ 6161223 (+) |
| G1585978 | NA | non-coding | upstream | 7964 | 6160321 ~ 6160543 (+) |
| G1585975 | NA | non-coding | upstream | 11870 | 6156437 ~ 6156637 (+) |
| G1585964 | NA | non-coding | upstream | 46085 | 6122212 ~ 6122422 (+) |
| G1585983 | NA | non-coding | downstream | 492 | 6169580 ~ 6170827 (+) |
| G1585989 | NA | non-coding | downstream | 14028 | 6183116 ~ 6183407 (+) |
| G1585991 | NA | non-coding | downstream | 17202 | 6186290 ~ 6186990 (+) |
| G1585995 | NA | non-coding | downstream | 25027 | 6194115 ~ 6194462 (+) |
| G1585997 | NA | non-coding | downstream | 29498 | 6198586 ~ 6198960 (+) |
| G1585804 | NA | other | upstream | 355654 | 5808978 ~ 5812853 (+) |
| G1585483 | NA | other | upstream | 453132 | 5643756 ~ 5715375 (+) |
| LOC110497310 | gstcd | other | upstream | 677360 | 5428914 ~ 5491185 (+) |
| G1585375 | NA | other | upstream | 719569 | 5448476 ~ 5448938 (+) |
| G1584899 | NA | other | upstream | 1040223 | 5121991 ~ 5128284 (+) |
| G1586200 | NA | other | downstream | 192760 | 6361848 ~ 6362312 (+) |
| G1586672 | NA | other | downstream | 885757 | 7054845 ~ 7056469 (+) |
| G1587727 | LOC106598223 | other | downstream | 2570456 | 8739544 ~ 8844780 (+) |
| G1587790 | LOC106610525 | other | downstream | 2731898 | 8900986 ~ 8947363 (+) |
