G1585997


Basic Information

Item Value
gene id G1585997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6198586 ~ 6198960 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815846
GTTGAGTATGGGGGCTATAGTAATCACAGCATGTGGCAGACCGTATTAAATGTCTGTTtagacacagaacacaacattGAATGTGTCTGCATCGGCTGAGATTTGTGCTGTAGGCATTAATACTGTAACTATGGTTACATAGCTCTTTTCACATAAGAGGGAAGATCTAAATCAGTGTGTATCTTAGCATAGACTTGTGAAGTAGGAGACTTACATCTTATCAGGTACCAGGAGAAAGGGATCCTCTGGGTCCATCTGAAAGTCAAGGAAATCAAGTTGATCAACTGCACAATGAGCCATCATCAGTGCCTAGCCAAACTGCAAGCCCTTTGGCTGTGTTCATACAGGCAGACCAATTTTCATATTTCTCTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815846 True 375 lncRNA 0.42 1 6198586 6198960

Neighbor

gene id symbol gene type direction distance location
LOC110497334 LOC106610305 coding upstream 46641 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 222822 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 225107 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 232507 5943625 ~ 5966079 (+)
aimp1a aimp1 coding upstream 391359 5783970 ~ 5807227 (+)
LOC110497332 LOC106610302 coding downstream 7333 6206293 ~ 6222302 (+)
LOC118941431 NA coding downstream 87221 6286181 ~ 6288416 (+)
LOC118941432 NA coding downstream 93109 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1361450 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 1376522 7575482 ~ 7766837 (+)
G1585995 NA non-coding upstream 4124 6194115 ~ 6194462 (+)
G1585991 NA non-coding upstream 11596 6186290 ~ 6186990 (+)
G1585989 NA non-coding upstream 15179 6183116 ~ 6183407 (+)
G1585983 NA non-coding upstream 27759 6169580 ~ 6170827 (+)
G1585982 LOC106610304 non-coding upstream 29498 6168507 ~ 6169088 (+)
G1586011 NA non-coding downstream 19547 6218507 ~ 6218830 (+)
G1586019 NA non-coding downstream 52167 6251127 ~ 6251362 (+)
G1586181 NA non-coding downstream 117275 6316235 ~ 6316553 (+)
G1586192 NA non-coding downstream 137912 6336872 ~ 6337187 (+)
G1585804 NA other upstream 385733 5808978 ~ 5812853 (+)
G1585483 NA other upstream 483211 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 707439 5428914 ~ 5491185 (+)
G1586200 NA other downstream 162888 6361848 ~ 6362312 (+)
G1586672 NA other downstream 855885 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2540584 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2702026 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 2794494 8993454 ~ 9063965 (+)

Expression


Co-expression Network