G1586011


Basic Information

Item Value
gene id G1586011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6218507 ~ 6218830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1815861
ccttgatgtttctacaacttgattggaggccacctgtggtaaattcaattgattggacatgatttggaaaggcacacgcctgtctgtataaggtcccacagttgacagtgcatgccagaacAAAAACAATGCCATGAGGTCGacagaattgtccgtagagctccgagaattgttgaggcacagatatggggaagggtaccaaaaaatgtctgcagcattgaaggtccccaagaactcagtggcctccattcttaaatggaatacgtttggaaccaccaagacccttcctagaacTGGCTGCCTGAccaaaatgagcaatcgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1815861 True 324 lncRNA 0.47 1 6218507 6218830

Neighbor

gene id symbol gene type direction distance location
LOC110497334 LOC106610305 coding upstream 66562 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 242743 5972346 ~ 5975764 (+)
LOC110497324 LOC106602293 coding upstream 245028 5966198 ~ 5973479 (+)
LOC118941430 LOC106602292 coding upstream 252428 5943625 ~ 5966079 (+)
aimp1a aimp1 coding upstream 411280 5783970 ~ 5807227 (+)
LOC118941431 NA coding downstream 67351 6286181 ~ 6288416 (+)
LOC118941432 NA coding downstream 73239 6292069 ~ 6294461 (+)
sclt1 sclt1 coding downstream 1341580 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 1356652 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 1818964 8037794 ~ 8043805 (+)
G1585997 NA non-coding upstream 19547 6198586 ~ 6198960 (+)
G1585995 NA non-coding upstream 24045 6194115 ~ 6194462 (+)
G1585991 NA non-coding upstream 31517 6186290 ~ 6186990 (+)
G1585989 NA non-coding upstream 35100 6183116 ~ 6183407 (+)
G1585983 NA non-coding upstream 47680 6169580 ~ 6170827 (+)
G1586019 NA non-coding downstream 32297 6251127 ~ 6251362 (+)
G1586181 NA non-coding downstream 97405 6316235 ~ 6316553 (+)
G1586192 NA non-coding downstream 118042 6336872 ~ 6337187 (+)
G1586221 NA non-coding downstream 232982 6451812 ~ 6452628 (+)
G1586255 NA non-coding downstream 345731 6564561 ~ 6564984 (+)
G1585804 NA other upstream 405654 5808978 ~ 5812853 (+)
G1585483 NA other upstream 503132 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 727360 5428914 ~ 5491185 (+)
G1586200 NA other downstream 143018 6361848 ~ 6362312 (+)
G1586672 NA other downstream 836015 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 2520714 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2682156 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 2774624 8993454 ~ 9063965 (+)

Expression


Co-expression Network