G1586304


Basic Information

Item Value
gene id G1586304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6393583 ~ 6475225 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1816203
TAGTGTGTGTGTGTGTGTATTTTaagagtgtgttagtgtgtgtgttagtgtgtgtgtgttagtgtgtgtatgttagtgtgtgtgtgtgtgttagtgtgtgtgtgtgtgttagtgtgtgtatgttagtgtgtgtgtgtgtgtatgttagtgtgtatgtgttagtgtgtatatgttactgtgtatgttagtgtgtgtgtatgttagtgtgtgttagtgtgtgtgtatgttagtgtgtgtgtgtatgttagtgtgtgtgtgtgtgtgtatgttagtgtgtgtgtgtgtgtgtgtgttagtgtgtgtgttagtgtgtgtgttagtgtgtatgttagtgtgtatgttagtgtgtgcgttagttagtgtgtgttagtgtgtgtgtttgttagtgtgtgtatgttagtgtgtgtgttagtgtgtgtgtgtatgttagtgtgtgtgtgtatgttagtgtgtgtgtatgttagtgtgtgtgtgtgtgttagtgtgtgtgttagtgtgtatgttagtgtgtgtgttagtgtgtgcgtTAGTGTGCCAGAGAGAGATTAAATTCCCTTACACTGACTCCTCATCTCTAGCCCCTCTGTCTCTTACTCGATGGCCATGCCAGTACGCCACGGCTCCTAGAGAGAGCTTGCAAAGGAGCTGAGAAAACTGCCCTGACACGGAACAGACTGTCCAGAACAGAATAGCCAGACtagaggatagggagagagaaaggagagcagagggactggTCTGAGAACGAAAGCGGTCTGGCAGGGACCTGCAGCAGTCACTTAACAAGgcaggagacatggagagaagcagagagagcgagaaagccgTGCCAGCCTTCTTGACTGTCTGGCTGGAAAGTGATGGAGTCCCCTGACCTTtccactcttctccctctcctccttcacgggagacattacagtacattttctcctctctcctttgagAGGGCCTGACCcctcaatctccctccctccctctttcttacCATCTTTAGCCCACTTGGGTCCAGGACAGAGCCCAGTTGTCAGGCCGATGGGACCATTACTGTCCTGGCTCAGTCCCCAGGAGGAGAAGGCCTCTTAAAACCCTCACTGGCCAGCTTGAGTGGAGTGAGCCTTTAATATTTCATTAGGGGACTCTTGACTGCCAAATGTCAGTTTCCCCACAACACACCatcactgaaagagagagagagagcgatggaaggagagagatgacaaTGGAGCAGGTGGGGTTGTCTAGTGATCCGTTATGGATCGTATACCTCTGTCCACTTTGTTTAAGTCTGTGGAGAGCAGGGTAGGATGTTAACCCAGTGTAAGTGGAGGGGGATGTTTGCAAGCTGTCTGGTTAACGTCATCCATCTTGAAAAATACATGTGGCAAGGCTCAAAAGACACATGGGCAGATTGGTGGTTTTACAGATGATACGCTGTGGTCCAACATTACCCTCAGAACTTGGTAACAGCAATTCTACAGTAAATGATCCTGGAACAAATAAAAAACatgcagaaaatgtgctttttacCCATTTGGCAAAATAACATCTCTCAATCCTTAACATTATAGCAAGTCACCCCAAACTATTTACCAACATGCCAATCTtacttttttatatataaataatctCAAAAAGACTGTGTACATTTTCTTTTCCACAGTGATGTTTTTGTGTAGCTGTCTGGTTCTCTTTGTGCTAAACGGCTGTGTTTCCGCCCTGCAACCAGAGGCCTGCATCTCAATCAACTCTTATTTTCACTGCCTGGCAGAgcagcattgctgcagagacACACCGCAAACTGCAGCATCTACAACAGGGGAAGCTTGCATCACTCTTGGTTTCATAATGGTGACATTGGCAGCTTCATGAATACTGTATGTCTCCTAAACAGGTTTTTCCCATTAGCAGACTGGAGGAGAAAACAAGGTCCTCTTTCTTAATTGATTTTGTTTTGTTGCTTTCCTTGTATTTTTCTGTATCATAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1816203 True 1986 lncRNA 0.45 3 6393583 6475225

Neighbor

gene id symbol gene type direction distance location
LOC110497343 LOC106610301 coding downstream 150181 6222321 ~ 6243402 (-)
LOC110497330 LOC106610300 coding downstream 187558 6186278 ~ 6206025 (-)
LOC110497340 djb14 coding downstream 212146 6170059 ~ 6181437 (-)
LOC110497335 LOC106610304 coding downstream 224651 6165686 ~ 6168932 (-)
casp6 LOC100135902 coding downstream 238233 6149828 ~ 6155350 (-)
LOC110514880 LOC106610486 coding upstream 574966 7050191 ~ 7086828 (-)
LOC110497203 LOC106602151 coding upstream 1077490 7552715 ~ 7560433 (-)
LOC118941433 LOC106610372 coding upstream 1298377 7773602 ~ 7873226 (-)
LOC110500908 LOC106592107 coding upstream 1411076 7886301 ~ 7908783 (-)
LOC110512762 LOC108236415 coding upstream 1463002 7938227 ~ 7981094 (-)
G1586284 NA non-coding downstream 81948 6311240 ~ 6311635 (-)
G1586275 NA non-coding downstream 97950 6295250 ~ 6295633 (-)
G1586162 NA non-coding downstream 132548 6260773 ~ 6261035 (-)
G1586160 NA non-coding downstream 140912 6252369 ~ 6252671 (-)
G1586153 NA non-coding downstream 173417 6219615 ~ 6220166 (-)
G1586336 NA non-coding upstream 3647 6478872 ~ 6479612 (-)
G1586344 NA non-coding upstream 24376 6499601 ~ 6499958 (-)
G1586362 NA non-coding upstream 90000 6565225 ~ 6565957 (-)
G1586373 NA non-coding upstream 134592 6609817 ~ 6610468 (-)
G1586381 NA non-coding upstream 146884 6622109 ~ 6622844 (-)
LOC110497317 LOC106593018 other downstream 749591 5635283 ~ 5667507 (-)
G1585234 NA other downstream 1244906 5148376 ~ 5148677 (-)
G1585201 LOC106610364 other downstream 1317977 5073480 ~ 5075606 (-)
G1586357 NA other upstream 69998 6545223 ~ 6545867 (-)
G1586560 NA other upstream 404101 6879326 ~ 6879757 (-)
G1587221 NA other upstream 1297818 7773043 ~ 7773434 (-)
G1587522 LOC106598223 other upstream 1671032 8146257 ~ 8225033 (-)

Expression


Co-expression Network