Gene
RNA
| Item | Value |
|---|---|
| gene id | G1586336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 6478872 ~ 6479612 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1816239 | False | 389 | lncRNA | 0.39 | 3 | 6478872 | 6479612 |
| TU1816240 | True | 389 | lncRNA | 0.39 | 4 | 6478872 | 6479612 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497343 | LOC106610301 | coding | downstream | 235470 | 6222321 ~ 6243402 (-) |
| LOC110497330 | LOC106610300 | coding | downstream | 272847 | 6186278 ~ 6206025 (-) |
| LOC110497340 | djb14 | coding | downstream | 297435 | 6170059 ~ 6181437 (-) |
| LOC110497335 | LOC106610304 | coding | downstream | 309940 | 6165686 ~ 6168932 (-) |
| casp6 | LOC100135902 | coding | downstream | 323522 | 6149828 ~ 6155350 (-) |
| LOC110514880 | LOC106610486 | coding | upstream | 570579 | 7050191 ~ 7086828 (-) |
| LOC110497203 | LOC106602151 | coding | upstream | 1073103 | 7552715 ~ 7560433 (-) |
| LOC118941433 | LOC106610372 | coding | upstream | 1293990 | 7773602 ~ 7873226 (-) |
| LOC110500908 | LOC106592107 | coding | upstream | 1406689 | 7886301 ~ 7908783 (-) |
| LOC110512762 | LOC108236415 | coding | upstream | 1458615 | 7938227 ~ 7981094 (-) |
| G1586304 | NA | non-coding | downstream | 3647 | 6393583 ~ 6475225 (-) |
| G1586327 | NA | non-coding | downstream | 26017 | 6451565 ~ 6452855 (-) |
| LOC110518704 | bnc2 | non-coding | downstream | 78958 | 6369407 ~ 6553918 (-) |
| G1586284 | NA | non-coding | downstream | 167237 | 6311240 ~ 6311635 (-) |
| G1586275 | NA | non-coding | downstream | 183239 | 6295250 ~ 6295633 (-) |
| G1586344 | NA | non-coding | upstream | 19989 | 6499601 ~ 6499958 (-) |
| G1586362 | NA | non-coding | upstream | 85613 | 6565225 ~ 6565957 (-) |
| G1586373 | NA | non-coding | upstream | 130205 | 6609817 ~ 6610468 (-) |
| G1586381 | NA | non-coding | upstream | 142497 | 6622109 ~ 6622844 (-) |
| G1586382 | NA | non-coding | upstream | 143433 | 6623045 ~ 6623273 (-) |
| LOC110497317 | LOC106593018 | other | downstream | 834880 | 5635283 ~ 5667507 (-) |
| G1585234 | NA | other | downstream | 1330195 | 5148376 ~ 5148677 (-) |
| G1585201 | LOC106610364 | other | downstream | 1403266 | 5073480 ~ 5075606 (-) |
| G1586357 | NA | other | upstream | 65611 | 6545223 ~ 6545867 (-) |
| G1586560 | NA | other | upstream | 399714 | 6879326 ~ 6879757 (-) |
| G1587221 | NA | other | upstream | 1293431 | 7773043 ~ 7773434 (-) |
| G1587522 | LOC106598223 | other | upstream | 1666645 | 8146257 ~ 8225033 (-) |
