Gene
RNA
| Item | Value |
|---|---|
| gene id | G1586381 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 6622109 ~ 6622844 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized PPE family protein PPE12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1816288 | True | 736 | lncRNA | 0.37 | 1 | 6622109 | 6622844 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518704 | bnc2 | coding | downstream | 68191 | 6369407 ~ 6553918 (-) |
| LOC110497343 | LOC106610301 | coding | downstream | 378707 | 6222321 ~ 6243402 (-) |
| LOC110497330 | LOC106610300 | coding | downstream | 416084 | 6186278 ~ 6206025 (-) |
| LOC110497340 | djb14 | coding | downstream | 440672 | 6170059 ~ 6181437 (-) |
| LOC110497335 | LOC106610304 | coding | downstream | 453177 | 6165686 ~ 6168932 (-) |
| LOC110514880 | LOC106610486 | coding | upstream | 427347 | 7050191 ~ 7086828 (-) |
| LOC110497203 | LOC106602151 | coding | upstream | 929871 | 7552715 ~ 7560433 (-) |
| LOC118941433 | LOC106610372 | coding | upstream | 1150758 | 7773602 ~ 7873226 (-) |
| LOC110500908 | LOC106592107 | coding | upstream | 1263457 | 7886301 ~ 7908783 (-) |
| LOC110512762 | LOC108236415 | coding | upstream | 1315383 | 7938227 ~ 7981094 (-) |
| G1586373 | NA | non-coding | downstream | 11641 | 6609817 ~ 6610468 (-) |
| G1586362 | NA | non-coding | downstream | 56152 | 6565225 ~ 6565957 (-) |
| G1586344 | NA | non-coding | downstream | 122151 | 6499601 ~ 6499958 (-) |
| G1586336 | NA | non-coding | downstream | 142497 | 6478872 ~ 6479612 (-) |
| G1586304 | NA | non-coding | downstream | 146884 | 6393583 ~ 6475225 (-) |
| G1586382 | NA | non-coding | upstream | 201 | 6623045 ~ 6623273 (-) |
| G1586455 | NA | non-coding | upstream | 60410 | 6683254 ~ 6683746 (-) |
| G1586462 | NA | non-coding | upstream | 84977 | 6707821 ~ 6708093 (-) |
| G1586467 | NA | non-coding | upstream | 95621 | 6718465 ~ 6719110 (-) |
| G1586481 | NA | non-coding | upstream | 122553 | 6745397 ~ 6746482 (-) |
| G1586357 | NA | other | downstream | 76242 | 6545223 ~ 6545867 (-) |
| casp6 | LOC100135902 | other | downstream | 469308 | 6149828 ~ 6155350 (-) |
| LOC110497317 | LOC106593018 | other | downstream | 978117 | 5635283 ~ 5667507 (-) |
| G1585234 | NA | other | downstream | 1473432 | 5148376 ~ 5148677 (-) |
| G1586560 | NA | other | upstream | 256482 | 6879326 ~ 6879757 (-) |
| G1587221 | NA | other | upstream | 1150199 | 7773043 ~ 7773434 (-) |
| G1587522 | LOC106598223 | other | upstream | 1523413 | 8146257 ~ 8225033 (-) |
| G1587567 | NA | other | upstream | 1620714 | 8243558 ~ 8334878 (-) |
