Gene
RNA
| Item | Value |
|---|---|
| gene id | G1586442 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 6797804 ~ 6798326 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1816360 | False | 215 | lncRNA | 0.40 | 3 | 6797804 | 6798326 |
| TU1816361 | True | 355 | lncRNA | 0.41 | 2 | 6797804 | 6798326 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941432 | NA | coding | upstream | 503343 | 6292069 ~ 6294461 (+) |
| LOC118941431 | NA | coding | upstream | 509388 | 6286181 ~ 6288416 (+) |
| LOC110497332 | LOC106610302 | coding | upstream | 575502 | 6206293 ~ 6222302 (+) |
| LOC110497334 | LOC106610305 | coding | upstream | 645859 | 6122953 ~ 6151945 (+) |
| LOC110497328 | hadh | coding | upstream | 822040 | 5972346 ~ 5975764 (+) |
| sclt1 | sclt1 | coding | downstream | 762084 | 7560410 ~ 7575349 (+) |
| LOC110516931 | dnah6 | coding | downstream | 777156 | 7575482 ~ 7766837 (+) |
| LOC118941540 | NA | coding | downstream | 1239468 | 8037794 ~ 8043805 (+) |
| LOC110534596 | LOC106596936 | coding | downstream | 1259972 | 8058298 ~ 8065704 (+) |
| LOC110534593 | LOC106610539 | coding | downstream | 1273293 | 8071619 ~ 8136635 (+) |
| G1586436 | NA | non-coding | upstream | 11224 | 6786172 ~ 6786580 (+) |
| G1586435 | NA | non-coding | upstream | 13003 | 6784166 ~ 6784801 (+) |
| G1586412 | NA | non-coding | upstream | 68889 | 6728446 ~ 6728915 (+) |
| G1586391 | NA | non-coding | upstream | 120385 | 6676486 ~ 6677419 (+) |
| G1586375 | NA | non-coding | upstream | 180203 | 6617242 ~ 6617601 (+) |
| G1586528 | NA | non-coding | downstream | 47809 | 6846135 ~ 6849651 (+) |
| G1586544 | NA | non-coding | downstream | 62604 | 6860930 ~ 6863350 (+) |
| G1586547 | NA | non-coding | downstream | 69224 | 6867550 ~ 6867938 (+) |
| G1586551 | NA | non-coding | downstream | 73741 | 6872067 ~ 6872329 (+) |
| G1586558 | NA | non-coding | downstream | 80170 | 6878496 ~ 6878799 (+) |
| G1586200 | NA | other | upstream | 435492 | 6361848 ~ 6362312 (+) |
| G1585983 | NA | other | upstream | 626977 | 6169580 ~ 6170827 (+) |
| G1585804 | NA | other | upstream | 984951 | 5808978 ~ 5812853 (+) |
| G1585483 | NA | other | upstream | 1082429 | 5643756 ~ 5715375 (+) |
| G1585375 | NA | other | upstream | 1348866 | 5448476 ~ 5448938 (+) |
| G1586672 | NA | other | downstream | 256519 | 7054845 ~ 7056469 (+) |
| G1587727 | LOC106598223 | other | downstream | 1941218 | 8739544 ~ 8844780 (+) |
| G1587790 | LOC106610525 | other | downstream | 2102660 | 8900986 ~ 8947363 (+) |
| G1587805 | LOC106602251 | other | downstream | 2195128 | 8993454 ~ 9063965 (+) |
| G1588177 | LOC106610450 | other | downstream | 2544533 | 9342859 ~ 9413146 (+) |
