G1586528


Basic Information

Item Value
gene id G1586528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 6846135 ~ 6849651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1816466
gtgttgggctggagagaaaacacaatatcacactgggtgaggaacgagcggcattcagtgggctccccagagtaacacggcgggttattgattctgggctccggagattcgaaagccctggaagtggccggtggatcgaggcggagatggtgaacctgttctgtgaggttggagacttgggtggccagggtctcaacggcatgtcgagcagcagacaattcctgcttgtgtctgcctagcatcgctccctggatcccgacggctgagtggagaggatccgaagtcgctgggtccattcttggtcggattcttctgttacggtgagtgaatgaggacccaaaagcgaattaacttaaacagagcttctttaataaccaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttacag

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1816466 True 434 lncRNA 0.53 2 6846135 6849651

Neighbor

gene id symbol gene type direction distance location
LOC118941432 NA coding upstream 551674 6292069 ~ 6294461 (+)
LOC118941431 NA coding upstream 557719 6286181 ~ 6288416 (+)
LOC110497332 LOC106610302 coding upstream 623833 6206293 ~ 6222302 (+)
LOC110497334 LOC106610305 coding upstream 694190 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 870371 5972346 ~ 5975764 (+)
sclt1 sclt1 coding downstream 710759 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 725831 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 1188143 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 1208647 8058298 ~ 8065704 (+)
LOC110534593 LOC106610539 coding downstream 1221968 8071619 ~ 8136635 (+)
G1586442 NA non-coding upstream 47809 6797804 ~ 6798326 (+)
G1586436 NA non-coding upstream 59555 6786172 ~ 6786580 (+)
G1586435 NA non-coding upstream 61334 6784166 ~ 6784801 (+)
G1586412 NA non-coding upstream 117220 6728446 ~ 6728915 (+)
G1586391 NA non-coding upstream 168716 6676486 ~ 6677419 (+)
G1586544 NA non-coding downstream 11279 6860930 ~ 6863350 (+)
G1586547 NA non-coding downstream 17899 6867550 ~ 6867938 (+)
G1586551 NA non-coding downstream 22416 6872067 ~ 6872329 (+)
G1586558 NA non-coding downstream 28845 6878496 ~ 6878799 (+)
G1586575 NA non-coding downstream 42436 6892087 ~ 6892442 (+)
G1586200 NA other upstream 483823 6361848 ~ 6362312 (+)
G1585983 NA other upstream 675308 6169580 ~ 6170827 (+)
G1585804 NA other upstream 1033282 5808978 ~ 5812853 (+)
G1585483 NA other upstream 1130760 5643756 ~ 5715375 (+)
G1585375 NA other upstream 1397197 5448476 ~ 5448938 (+)
G1586672 NA other downstream 205194 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 1889893 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 2051335 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 2143803 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 2493208 9342859 ~ 9413146 (+)

Expression


Co-expression Network