G1586657


Basic Information

Item Value
gene id G1586657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 7030657 ~ 7030959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1816625
TCCTTTAGCCCTGCAGATGACAGACTGACACTGGTAttctgatggaacactgtggcctctctcctcctgcGGCCTGCAGATGACAGGCTGACACTATTAttctgatggaacactgtggcctcTTTCCTCCTGCGGCCTGCAGAAGACAGGCTGACACTGATAttctgatggaacactgtggcctcTTTCCTCCTGTGGCCTGCAGATAACAGACTGACACTGGTAttctgatggaacactgtggcctctctcctccttcagcccTGCAGATGACAGGCTGACACTGGTATTCTAATGGAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1816625 True 303 lncRNA 0.52 1 7030657 7030959

Neighbor

gene id symbol gene type direction distance location
LOC118941432 NA coding upstream 736196 6292069 ~ 6294461 (+)
LOC118941431 NA coding upstream 742241 6286181 ~ 6288416 (+)
LOC110497332 LOC106610302 coding upstream 808355 6206293 ~ 6222302 (+)
LOC110497334 LOC106610305 coding upstream 878712 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 1054893 5972346 ~ 5975764 (+)
sclt1 sclt1 coding downstream 529451 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 544523 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 1006835 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 1027339 8058298 ~ 8065704 (+)
LOC110534593 LOC106610539 coding downstream 1040660 8071619 ~ 8136635 (+)
G1586656 NA non-coding upstream 3262 7026680 ~ 7027395 (+)
G1586653 NA non-coding upstream 10230 7020083 ~ 7020427 (+)
G1586651 NA non-coding upstream 15394 7015006 ~ 7015263 (+)
G1586650 NA non-coding upstream 18872 7004108 ~ 7011785 (+)
G1586648 NA non-coding upstream 32070 6998315 ~ 6998587 (+)
G1586660 NA non-coding downstream 2131 7033090 ~ 7034632 (+)
G1586676 NA non-coding downstream 30664 7061623 ~ 7062427 (+)
G1586692 NA non-coding downstream 56266 7087225 ~ 7087457 (+)
G1586705 NA non-coding downstream 73694 7104653 ~ 7105011 (+)
G1586706 NA non-coding downstream 75313 7106272 ~ 7106532 (+)
G1586200 NA other upstream 668345 6361848 ~ 6362312 (+)
G1585983 NA other upstream 859830 6169580 ~ 6170827 (+)
G1585804 NA other upstream 1217804 5808978 ~ 5812853 (+)
G1585483 NA other upstream 1315282 5643756 ~ 5715375 (+)
G1585375 NA other upstream 1581719 5448476 ~ 5448938 (+)
G1586672 NA other downstream 23886 7054845 ~ 7056469 (+)
G1587727 LOC106598223 other downstream 1708585 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 1870027 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 1962495 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 2311900 9342859 ~ 9413146 (+)

Expression


Co-expression Network