G1586672


Basic Information

Item Value
gene id G1586672
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 7054845 ~ 7056469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1816647
TCCCACCCTCTCCAGACCAGTCTGATGTACCATATAGAAACAGGACAGAATGTTGCAATAGGCCTGTGCAACCCAAGGTTTTACAACAGCAGAAACATAAACCCTCTTAAACCTAAACCAAACCCCTCAGCTTAACATAGTCTTGGTCCTCATGGGgatgtgggaaatgtccccaTGAGGGAGAATCTTCCCCGCAAGGTTAGAAGAACcaacccatcacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacacagacacacacaacacacacacacacacacacacacacaacacacacttacacacacacacacacacacacacaaaaacaaacactcacacagaggGAAACAAACAAAGGGGCAGTGGGTAGATTAGTTCAGCACGAAGCAGAACTTCATCATGATTATTACCTGAGGGAGAATGAGCCAGCatgcagtaacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacagacacacacacacacacacacacacacacacacacacacacacacacagatacagacacacacacacacacacacacacacacagacacacaaacacacacacacacacacactcacacacacacacacacacacacccacacacacacacacacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagatacagacacagacacaggcacacacagacacacacacacacacacacacacacacacacacacacacgtagatccagacagacacacacacacacacagcatgcccTAAAATGTAGAATCACAATTAACAGCAGCGTGTTAATTTAGCAGTGGAGCAGCTCGTTATGTAACTAAGTGTTAAAACACAGTTAAAAACAACCGCCTTCACTCCCTGCCAGTTTAATGATGTCCTGGCGTTGTTGCTCTTTATGTTTCCATAGAAACACGTGGCACATGGTAGCCTACACCTTACATAGTGTATTTCTTTTAGCAAggtcccacagggctctggtcaaaagcagtacactacatagggaatagggtgcaatttcagACGCAGACCATAGTGAGAAGAGACTACTAGGTGGAAGGACAATCAGTAGTTGTGCAGGAAGGTGTTTTTAGATAACGAATGCCGTTATTTACCGATGAGTCGTAGGCTACGTCCCCGTTCCCTACTTTTCACCAGGACCCAGACGCATGTATAGTATGACATCATAATATTACTACTGAGCTCAGTACATGTATAGTATGACATCATAATATCACTACTGAGCTCAGTACATGTTTAGTATGACATCATAATATCACTACTGAGCTCAGTACATGTATAGTATGACATCATAATATCACTCACTACTGAGCTCAGTACATGCATAGTATGACATCATAATATCACTACTGAGCTCAGTACATGTATAGTATGACATCATAATATCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1816647 True 1583 TUCP 0.45 2 7054845 7056469

Neighbor

gene id symbol gene type direction distance location
LOC118941432 NA coding upstream 760384 6292069 ~ 6294461 (+)
LOC118941431 NA coding upstream 766429 6286181 ~ 6288416 (+)
LOC110497332 LOC106610302 coding upstream 832543 6206293 ~ 6222302 (+)
LOC110497334 LOC106610305 coding upstream 902900 6122953 ~ 6151945 (+)
LOC110497328 hadh coding upstream 1079081 5972346 ~ 5975764 (+)
sclt1 sclt1 coding downstream 503941 7560410 ~ 7575349 (+)
LOC110516931 dnah6 coding downstream 519013 7575482 ~ 7766837 (+)
LOC118941540 NA coding downstream 981325 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 1001829 8058298 ~ 8065704 (+)
LOC110534593 LOC106610539 coding downstream 1015150 8071619 ~ 8136635 (+)
G1586660 NA non-coding upstream 20213 7033090 ~ 7034632 (+)
G1586657 NA non-coding upstream 23886 7030657 ~ 7030959 (+)
G1586656 NA non-coding upstream 27450 7026680 ~ 7027395 (+)
G1586653 NA non-coding upstream 34418 7020083 ~ 7020427 (+)
G1586651 NA non-coding upstream 39582 7015006 ~ 7015263 (+)
G1586676 NA non-coding downstream 5154 7061623 ~ 7062427 (+)
G1586692 NA non-coding downstream 30756 7087225 ~ 7087457 (+)
G1586705 NA non-coding downstream 48184 7104653 ~ 7105011 (+)
G1586706 NA non-coding downstream 49803 7106272 ~ 7106532 (+)
G1586699 NA non-coding downstream 55944 7112413 ~ 7116899 (+)
G1586200 NA other upstream 692533 6361848 ~ 6362312 (+)
G1585983 NA other upstream 884018 6169580 ~ 6170827 (+)
G1585804 NA other upstream 1241992 5808978 ~ 5812853 (+)
G1585483 NA other upstream 1339470 5643756 ~ 5715375 (+)
LOC110497310 gstcd other upstream 1563698 5428914 ~ 5491185 (+)
G1587727 LOC106598223 other downstream 1683075 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 1844517 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 1936985 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 2286390 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 2367296 9422781 ~ 9425478 (+)

Expression


Co-expression Network