G1587317


Basic Information

Item Value
gene id G1587317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 7995830 ~ 7996116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1817452
gagacgcatagagacagggatagacactgacagagagcaagagagacagagacagaaaaaaatAAGGGACACGAcagtgttttttaaattttatttcacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactacgacctggccaagataaagcaaagcagtgtgaacagacaacacagagttacacatggagtaaacgataaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1817452 True 254 lncRNA 0.40 2 7995830 7996116

Neighbor

gene id symbol gene type direction distance location
LOC110516931 dnah6 coding upstream 228993 7575482 ~ 7766837 (+)
sclt1 sclt1 coding upstream 420481 7560410 ~ 7575349 (+)
LOC118941432 NA coding upstream 1701369 6292069 ~ 6294461 (+)
LOC118941431 NA coding upstream 1707414 6286181 ~ 6288416 (+)
LOC110497332 LOC106610302 coding upstream 1773528 6206293 ~ 6222302 (+)
LOC118941540 NA coding downstream 41678 8037794 ~ 8043805 (+)
LOC110534596 LOC106596936 coding downstream 62182 8058298 ~ 8065704 (+)
LOC110534593 LOC106610539 coding downstream 75503 8071619 ~ 8136635 (+)
LOC110511263 LOC106577284 coding downstream 208336 8204452 ~ 8217573 (+)
LOC110513700 NA coding downstream 371304 8367420 ~ 8368960 (+)
G1587314 NA non-coding upstream 6926 7988027 ~ 7988904 (+)
G1587290 LOC106602119 non-coding upstream 53260 7941693 ~ 7942570 (+)
G1587128 NA non-coding upstream 81849 7913719 ~ 7913981 (+)
G1587125 NA non-coding upstream 87069 7908086 ~ 7908761 (+)
G1587124 NA non-coding upstream 87909 7907683 ~ 7907921 (+)
G1587336 NA non-coding downstream 35371 8031487 ~ 8033006 (+)
G1587395 LOC106569656 non-coding downstream 95311 8091427 ~ 8210499 (+)
G1587400 NA non-coding downstream 120108 8116224 ~ 8120340 (+)
G1587401 NA non-coding downstream 143128 8139244 ~ 8218373 (+)
G1587433 NA non-coding downstream 222427 8218543 ~ 8219545 (+)
G1586672 NA other upstream 939361 7054845 ~ 7056469 (+)
G1586200 NA other upstream 1633518 6361848 ~ 6362312 (+)
G1585983 NA other upstream 1825003 6169580 ~ 6170827 (+)
G1585804 NA other upstream 2182977 5808978 ~ 5812853 (+)
G1585483 NA other upstream 2280455 5643756 ~ 5715375 (+)
G1587727 LOC106598223 other downstream 743428 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 904870 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 997338 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 1346743 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 1427649 9422781 ~ 9425478 (+)

Expression


Co-expression Network