G1587720


Basic Information

Item Value
gene id G1587720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8665669 ~ 8666359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1817938
AAACACATTCTCTTGTCTGGTCACACCAGGAACTGATACCATCCCTTGTTCCACTCAATTTGGAGGGAAAACTATTTAACAGAAAAAGTATGTTTGTAAATGTGCCAACAGGAAGAACATTAAGGTTATACTCATGTCAAAGGCAACAACATTTTCATTGTAATCCAACAGAACATGAGGTCTGGATTGTTCTGGTGGGGAAGACTGGAGTTGGAAAGAGTGCAGCAGGAACCACCATCCTGGGGAGGAAAGATTTTGAAACAAATGCATCTCGTGACTGTTACAtcagaaagacagaaggagaggtggTGTCACATGAGATgtcgctggagagacgaagcaggtacggggagtaacatttaataaataacggacatataacgagacaggaacagcgtcagcaaacagaaaacaaagacaaaaaacaatcaatgaatcagcagggaacagagctggggaactgacaaatataggggaggaaatcaACAGGagataagtgagtccaggtgagtccaataacgcTGATGCGAGTgatgagggaaggcaggtgtgcatgATTGATGGCAGGAGCGTGTGATGCAGGGTAATctggcgccctcaagcgccagGGGAAGGGAAacgcgggagcagacgtgacaggtGGATGGGAAAAGTTTAGATgctatatactgaacaaaaatataaattcaac

Function

NR:

description
PREDICTED: GTPase IMAP family member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1817938 True 691 lncRNA 0.44 1 8665669 8666359

Neighbor

gene id symbol gene type direction distance location
LOC118941439 NA coding upstream 22048 8640309 ~ 8643621 (+)
LOC110497214 LOC106610534 coding upstream 25445 8627294 ~ 8640224 (+)
LOC110498609 LOC106610517 coding upstream 38823 8611926 ~ 8626846 (+)
LOC110534718 NA coding upstream 56325 8608164 ~ 8609344 (+)
LOC118941437 LOC106594846 coding upstream 159013 8499287 ~ 8506656 (+)
LOC110497213 LOC106610529 coding downstream 4560 8670919 ~ 8707687 (+)
LOC118941438 LOC106610528 coding downstream 47327 8713686 ~ 8741009 (+)
LOC118941440 LOC106577279 coding downstream 117508 8778760 ~ 8802053 (+)
LOC118941441 NA coding downstream 153783 8820142 ~ 8824446 (+)
vwa11 LOC106610525 coding downstream 208750 8875109 ~ 8904658 (+)
G1587712 LOC106610491 non-coding upstream 11020 8654182 ~ 8654649 (+)
G1587711 LOC106610491 non-coding upstream 11563 8653515 ~ 8654106 (+)
G1587710 LOC106610491 non-coding upstream 12656 8652646 ~ 8653013 (+)
G1587705 NA non-coding upstream 58560 8606128 ~ 8607109 (+)
G1587738 NA non-coding downstream 58504 8724863 ~ 8725236 (+)
G1587741 NA non-coding downstream 68482 8734841 ~ 8735293 (+)
G1586672 NA other upstream 1609200 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2303357 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2494842 6169580 ~ 6170827 (+)
G1585804 NA other upstream 2852816 5808978 ~ 5812853 (+)
G1585483 NA other upstream 2950294 5643756 ~ 5715375 (+)
G1587727 LOC106598223 other downstream 73185 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 234627 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 327095 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 676500 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 757406 9422781 ~ 9425478 (+)

Expression


Co-expression Network